Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv5-45A0A0B4J1J1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.48■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Fst-202ENSMUST00000223640 2612 ntBASIC18.47■□□□□ 0.55
Igkv5-45A0A0B4J1J1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.47■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Igkv5-45A0A0B4J1J1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Gm37055-201ENSMUST00000191866 133 ntBASIC18.47■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.47■□□□□ 0.55
Igkv5-45A0A0B4J1J1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.47■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.46■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv5-45A0A0B4J1J1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.46■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv5-45A0A0B4J1J1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.45■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv5-45A0A0B4J1J1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Gm21814-202ENSMUST00000203277 873 ntBASIC18.45■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.44■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.44■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-45A0A0B4J1J1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.44■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-45A0A0B4J1J1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.44■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.44■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv5-45A0A0B4J1J1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.43■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.43■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Igkv5-45A0A0B4J1J1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.43■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv5-45A0A0B4J1J1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms