Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HAPLN3Q96S86 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HAPLN3Q96S86 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HAPLN3Q96S86 AC026185.1-201ENST00000445748 174 ntBASIC21.42■■□□□ 1.02
HAPLN3Q96S86 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
HAPLN3Q96S86 AC068338.2-201ENST00000563278 1430 ntBASIC21.42■■□□□ 1.02
HAPLN3Q96S86 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.42■■□□□ 1.02
HAPLN3Q96S86 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.42■■□□□ 1.02
HAPLN3Q96S86 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HAPLN3Q96S86 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HAPLN3Q96S86 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
HAPLN3Q96S86 AC005229.4-201ENST00000610085 2198 ntBASIC21.41■■□□□ 1.02
HAPLN3Q96S86 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HAPLN3Q96S86 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HAPLN3Q96S86 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HAPLN3Q96S86 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
HAPLN3Q96S86 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
HAPLN3Q96S86 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HAPLN3Q96S86 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.41■■□□□ 1.02
HAPLN3Q96S86 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HAPLN3Q96S86 CDV3P1-201ENST00000471403 739 ntBASIC21.41■■□□□ 1.02
HAPLN3Q96S86 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HAPLN3Q96S86 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
HAPLN3Q96S86 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.41■■□□□ 1.02
HAPLN3Q96S86 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.41■■□□□ 1.02
HAPLN3Q96S86 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HAPLN3Q96S86 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
HAPLN3Q96S86 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
HAPLN3Q96S86 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.41■■□□□ 1.02
HAPLN3Q96S86 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HAPLN3Q96S86 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
HAPLN3Q96S86 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.4■■□□□ 1.02
HAPLN3Q96S86 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HAPLN3Q96S86 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HAPLN3Q96S86 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.4■■□□□ 1.02
HAPLN3Q96S86 AC011484.1-201ENST00000377652 1995 ntBASIC21.4■■□□□ 1.02
HAPLN3Q96S86 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HAPLN3Q96S86 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
HAPLN3Q96S86 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HAPLN3Q96S86 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
HAPLN3Q96S86 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HAPLN3Q96S86 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
HAPLN3Q96S86 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
HAPLN3Q96S86 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
HAPLN3Q96S86 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HAPLN3Q96S86 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
HAPLN3Q96S86 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
HAPLN3Q96S86 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
HAPLN3Q96S86 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.39■■□□□ 1.02
HAPLN3Q96S86 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
HAPLN3Q96S86 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
HAPLN3Q96S86 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
HAPLN3Q96S86 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.39■■□□□ 1.01
HAPLN3Q96S86 AC007322.3-201ENST00000426526 701 ntBASIC21.39■■□□□ 1.01
HAPLN3Q96S86 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.39■■□□□ 1.01
HAPLN3Q96S86 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
HAPLN3Q96S86 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.39■■□□□ 1.01
HAPLN3Q96S86 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.39■■□□□ 1.01
HAPLN3Q96S86 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HAPLN3Q96S86 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
HAPLN3Q96S86 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.39■■□□□ 1.01
HAPLN3Q96S86 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HAPLN3Q96S86 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.39■■□□□ 1.01
HAPLN3Q96S86 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
HAPLN3Q96S86 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HAPLN3Q96S86 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HAPLN3Q96S86 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.38■■□□□ 1.01
HAPLN3Q96S86 AC121338.2-201ENST00000622535 1744 ntBASIC21.38■■□□□ 1.01
HAPLN3Q96S86 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.38■■□□□ 1.01
HAPLN3Q96S86 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.38■■□□□ 1.01
HAPLN3Q96S86 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.38■■□□□ 1.01
HAPLN3Q96S86 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.38■■□□□ 1.01
HAPLN3Q96S86 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.38■■□□□ 1.01
HAPLN3Q96S86 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.38■■□□□ 1.01
HAPLN3Q96S86 FAM21FP-204ENST00000608637 956 ntBASIC21.38■■□□□ 1.01
HAPLN3Q96S86 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.38■■□□□ 1.01
HAPLN3Q96S86 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.38■■□□□ 1.01
HAPLN3Q96S86 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HAPLN3Q96S86 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HAPLN3Q96S86 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HAPLN3Q96S86 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HAPLN3Q96S86 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HAPLN3Q96S86 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.38■■□□□ 1.01
HAPLN3Q96S86 AC092667.1-201ENST00000434301 2586 ntBASIC21.38■■□□□ 1.01
HAPLN3Q96S86 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.38■■□□□ 1.01
HAPLN3Q96S86 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HAPLN3Q96S86 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.37■■□□□ 1.01
HAPLN3Q96S86 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.37■■□□□ 1.01
HAPLN3Q96S86 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HAPLN3Q96S86 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.37■■□□□ 1.01
HAPLN3Q96S86 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HAPLN3Q96S86 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HAPLN3Q96S86 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HAPLN3Q96S86 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HAPLN3Q96S86 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
HAPLN3Q96S86 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.37■■□□□ 1.01
HAPLN3Q96S86 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
HAPLN3Q96S86 AC005181.1-201ENST00000604782 1256 ntBASIC21.37■■□□□ 1.01
HAPLN3Q96S86 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HAPLN3Q96S86 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms