Protein–RNA interactions for Protein: Q70CQ3

USP30, Ubiquitin carboxyl-terminal hydrolase 30, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP30Q70CQ3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.74■□□□□ 0.91
USP30Q70CQ3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP30Q70CQ3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP30Q70CQ3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.73■□□□□ 0.91
USP30Q70CQ3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP30Q70CQ3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP30Q70CQ3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
USP30Q70CQ3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP30Q70CQ3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.73■□□□□ 0.91
USP30Q70CQ3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.73■□□□□ 0.91
USP30Q70CQ3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP30Q70CQ3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.73■□□□□ 0.91
USP30Q70CQ3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP30Q70CQ3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP30Q70CQ3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.72■□□□□ 0.91
USP30Q70CQ3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP30Q70CQ3 AC116050.2-201ENST00000612102 1779 ntBASIC20.72■□□□□ 0.91
USP30Q70CQ3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP30Q70CQ3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP30Q70CQ3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
USP30Q70CQ3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
USP30Q70CQ3 AC026366.1-201ENST00000488803 879 ntBASIC20.72■□□□□ 0.91
USP30Q70CQ3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.72■□□□□ 0.91
USP30Q70CQ3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.72■□□□□ 0.91
USP30Q70CQ3 HLA-B-256ENST00000639848 1089 ntBASIC20.72■□□□□ 0.91
USP30Q70CQ3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.72■□□□□ 0.91
USP30Q70CQ3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP30Q70CQ3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP30Q70CQ3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP30Q70CQ3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.72■□□□□ 0.91
USP30Q70CQ3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.72■□□□□ 0.91
USP30Q70CQ3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP30Q70CQ3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
USP30Q70CQ3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP30Q70CQ3 GUSBP5-202ENST00000510805 1989 ntBASIC20.72■□□□□ 0.91
USP30Q70CQ3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP30Q70CQ3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP30Q70CQ3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP30Q70CQ3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP30Q70CQ3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP30Q70CQ3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP30Q70CQ3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP30Q70CQ3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.71■□□□□ 0.91
USP30Q70CQ3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
USP30Q70CQ3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP30Q70CQ3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP30Q70CQ3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
USP30Q70CQ3 AC060766.5-201ENST00000590539 871 ntBASIC20.71■□□□□ 0.91
USP30Q70CQ3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP30Q70CQ3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.71■□□□□ 0.91
USP30Q70CQ3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP30Q70CQ3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
USP30Q70CQ3 CYP21A1P-202ENST00000354927 1481 ntBASIC20.7■□□□□ 0.9
USP30Q70CQ3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP30Q70CQ3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP30Q70CQ3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.7■□□□□ 0.9
USP30Q70CQ3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.7■□□□□ 0.9
USP30Q70CQ3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP30Q70CQ3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP30Q70CQ3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.7■□□□□ 0.9
USP30Q70CQ3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP30Q70CQ3 AP003097.1-201ENST00000530657 1135 ntBASIC20.7■□□□□ 0.9
USP30Q70CQ3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP30Q70CQ3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP30Q70CQ3 AC006058.3-201ENST00000606217 1069 ntBASIC20.7■□□□□ 0.9
USP30Q70CQ3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
USP30Q70CQ3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.7■□□□□ 0.9
USP30Q70CQ3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP30Q70CQ3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP30Q70CQ3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP30Q70CQ3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP30Q70CQ3 AC233723.2-201ENST00000623798 2106 ntBASIC20.69■□□□□ 0.9
USP30Q70CQ3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP30Q70CQ3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
USP30Q70CQ3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.69■□□□□ 0.9
USP30Q70CQ3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.69■□□□□ 0.9
USP30Q70CQ3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP30Q70CQ3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
USP30Q70CQ3 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.69■□□□□ 0.9
USP30Q70CQ3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP30Q70CQ3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
USP30Q70CQ3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP30Q70CQ3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.69■□□□□ 0.9
USP30Q70CQ3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP30Q70CQ3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP30Q70CQ3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.69■□□□□ 0.9
USP30Q70CQ3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP30Q70CQ3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.69■□□□□ 0.9
USP30Q70CQ3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
USP30Q70CQ3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP30Q70CQ3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP30Q70CQ3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP30Q70CQ3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP30Q70CQ3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP30Q70CQ3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP30Q70CQ3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
USP30Q70CQ3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.68■□□□□ 0.9
USP30Q70CQ3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP30Q70CQ3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP30Q70CQ3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms