Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.16■□□□□ 0.66
Trim43aQ3TL54 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43aQ3TL54 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43aQ3TL54 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43aQ3TL54 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43aQ3TL54 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43aQ3TL54 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Trim43aQ3TL54 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43aQ3TL54 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43aQ3TL54 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.15■□□□□ 0.66
Trim43aQ3TL54 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.15■□□□□ 0.66
Trim43aQ3TL54 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43aQ3TL54 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43aQ3TL54 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43aQ3TL54 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43aQ3TL54 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43aQ3TL54 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trim43aQ3TL54 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43aQ3TL54 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43aQ3TL54 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43aQ3TL54 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43aQ3TL54 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43aQ3TL54 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43aQ3TL54 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
Trim43aQ3TL54 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim43aQ3TL54 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43aQ3TL54 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43aQ3TL54 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43aQ3TL54 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43aQ3TL54 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.14■□□□□ 0.65
Trim43aQ3TL54 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43aQ3TL54 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trim43aQ3TL54 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43aQ3TL54 Gm10493-201ENSMUST00000097270 612 ntBASIC19.14■□□□□ 0.65
Trim43aQ3TL54 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43aQ3TL54 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43aQ3TL54 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43aQ3TL54 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43aQ3TL54 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43aQ3TL54 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43aQ3TL54 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43aQ3TL54 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43aQ3TL54 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Trim43aQ3TL54 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43aQ3TL54 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43aQ3TL54 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43aQ3TL54 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43aQ3TL54 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.13■□□□□ 0.65
Trim43aQ3TL54 Gm40848-201ENSMUST00000221998 324 ntBASIC19.13■□□□□ 0.65
Trim43aQ3TL54 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43aQ3TL54 Gm5874-201ENSMUST00000096101 508 ntBASIC19.13■□□□□ 0.65
Trim43aQ3TL54 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43aQ3TL54 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43aQ3TL54 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43aQ3TL54 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43aQ3TL54 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43aQ3TL54 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Trim43aQ3TL54 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43aQ3TL54 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43aQ3TL54 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43aQ3TL54 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trim43aQ3TL54 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43aQ3TL54 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43aQ3TL54 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43aQ3TL54 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43aQ3TL54 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43aQ3TL54 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.12■□□□□ 0.65
Trim43aQ3TL54 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.12■□□□□ 0.65
Trim43aQ3TL54 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43aQ3TL54 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43aQ3TL54 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43aQ3TL54 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43aQ3TL54 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
Trim43aQ3TL54 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43aQ3TL54 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43aQ3TL54 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43aQ3TL54 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43aQ3TL54 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Trim43aQ3TL54 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43aQ3TL54 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43aQ3TL54 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43aQ3TL54 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43aQ3TL54 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43aQ3TL54 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Trim43aQ3TL54 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43aQ3TL54 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43aQ3TL54 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43aQ3TL54 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43aQ3TL54 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Trim43aQ3TL54 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43aQ3TL54 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43aQ3TL54 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43aQ3TL54 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43aQ3TL54 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43aQ3TL54 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43aQ3TL54 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43aQ3TL54 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43aQ3TL54 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43aQ3TL54 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.1■□□□□ 0.65
Trim43aQ3TL54 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms