Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 GDI1YER136W 1356 nt3.56□□□□□ -1.84
SSL2Q00578 SSF1YHR066W 1362 nt3.56□□□□□ -1.84
SSL2Q00578 SMT3YDR510W 306 nt3.56□□□□□ -1.84
SSL2Q00578 EMI1YDR512C 564 nt3.56□□□□□ -1.84
SSL2Q00578 tQ(UUG)BtQ(UUG)B 72 nt3.56□□□□□ -1.84
SSL2Q00578 NMD2YHR077C 3270 nt3.56□□□□□ -1.84
SSL2Q00578 YJR098CYJR098C 1971 nt3.56□□□□□ -1.84
SSL2Q00578 NOP4YPL043W 2058 nt3.55□□□□□ -1.84
SSL2Q00578 VPS9YML097C 1356 nt3.55□□□□□ -1.84
SSL2Q00578 YCR090CYCR090C 549 nt3.55□□□□□ -1.84
SSL2Q00578 HTA1YDR225W 399 nt3.55□□□□□ -1.84
SSL2Q00578 YIL141WYIL141W 390 nt3.55□□□□□ -1.84
SSL2Q00578 ABM1YJR108W 372 nt3.55□□□□□ -1.84
SSL2Q00578 YKL083WYKL083W 615 nt3.55□□□□□ -1.84
SSL2Q00578 YBL039W-BYBL039W-B 180 nt3.55□□□□□ -1.84
SSL2Q00578 SEA4YBL104C 3117 nt3.55□□□□□ -1.84
SSL2Q00578 RRP5YMR229C 5190 nt3.55□□□□□ -1.84
SSL2Q00578 HFD1YMR110C 1599 nt3.55□□□□□ -1.84
SSL2Q00578 IRC3YDR332W 2070 nt3.55□□□□□ -1.84
SSL2Q00578 BI4Q0120 1917 nt3.54□□□□□ -1.84
SSL2Q00578 DRS2YAL026C 4068 nt3.54□□□□□ -1.84
SSL2Q00578 GCD6YDR211W 2139 nt3.54□□□□□ -1.84
SSL2Q00578 LIF1YGL090W 1266 nt3.54□□□□□ -1.84
SSL2Q00578 YLR434CYLR434C 384 nt3.54□□□□□ -1.84
SSL2Q00578 PKR1YMR123W 369 nt3.54□□□□□ -1.84
SSL2Q00578 CDC33YOL139C 642 nt3.54□□□□□ -1.84
SSL2Q00578 YBR032WYBR032W 303 nt3.54□□□□□ -1.84
SSL2Q00578 YBR201C-AYBR201C-A 204 nt3.54□□□□□ -1.84
SSL2Q00578 UTP15YMR093W 1542 nt3.54□□□□□ -1.84
SSL2Q00578 RPN1YHR027C 2982 nt3.54□□□□□ -1.84
SSL2Q00578 SCY1YGL083W 2415 nt3.53□□□□□ -1.84
SSL2Q00578 DBF20YPR111W 1695 nt3.53□□□□□ -1.84
SSL2Q00578 YJL132WYJL132W 2253 nt3.53□□□□□ -1.84
SSL2Q00578 OPI6YDL096C 327 nt3.53□□□□□ -1.84
SSL2Q00578 FMP32YFL046W 624 nt3.53□□□□□ -1.84
SSL2Q00578 NBL1YHR199C-A 222 nt3.53□□□□□ -1.84
SSL2Q00578 YJL169WYJL169W 369 nt3.53□□□□□ -1.84
SSL2Q00578 MRPL31YKL138C 396 nt3.53□□□□□ -1.84
SSL2Q00578 YBL028CYBL028C 321 nt3.53□□□□□ -1.84
SSL2Q00578 NOP15YNL110C 663 nt3.53□□□□□ -1.84
SSL2Q00578 SYO1YDL063C 1863 nt3.53□□□□□ -1.84
SSL2Q00578 RED1YLR263W 2484 nt3.53□□□□□ -1.84
SSL2Q00578 APC5YOR249C 2058 nt3.53□□□□□ -1.84
SSL2Q00578 REG1YDR028C 3045 nt3.52□□□□□ -1.85
SSL2Q00578 MSH2YOL090W 2895 nt3.52□□□□□ -1.85
SSL2Q00578 CHS2YBR038W 2892 nt3.52□□□□□ -1.85
SSL2Q00578 SNA4YDL123W 423 nt3.52□□□□□ -1.85
SSL2Q00578 YER039C-AYER039C-A 219 nt3.52□□□□□ -1.85
SSL2Q00578 MVB12YGR206W 306 nt3.52□□□□□ -1.85
SSL2Q00578 MRP8YKL142W 660 nt3.52□□□□□ -1.85
SSL2Q00578 MRPL38YKL170W 417 nt3.52□□□□□ -1.85
SSL2Q00578 YMR141CYMR141C 309 nt3.52□□□□□ -1.85
SSL2Q00578 YPR053CYPR053C 456 nt3.52□□□□□ -1.85
SSL2Q00578 PEX6YNL329C 3093 nt3.52□□□□□ -1.85
SSL2Q00578 MPS1YDL028C 2295 nt3.51□□□□□ -1.85
SSL2Q00578 FAR1YJL157C 2493 nt3.51□□□□□ -1.85
SSL2Q00578 FAS1YKL182W 6156 nt3.51□□□□□ -1.85
SSL2Q00578 MYO5YMR109W 3660 nt3.51□□□□□ -1.85
SSL2Q00578 KAR9YPL269W 1935 nt3.51□□□□□ -1.85
SSL2Q00578 YDL009CYDL009C 324 nt3.51□□□□□ -1.85
SSL2Q00578 YHR212CYHR212C 336 nt3.51□□□□□ -1.85
SSL2Q00578 YIL046W-AYIL046W-A 165 nt3.51□□□□□ -1.85
SSL2Q00578 RPA12YJR063W 378 nt3.51□□□□□ -1.85
SSL2Q00578 YAR060CYAR060C 336 nt3.51□□□□□ -1.85
SSL2Q00578 YML009C-AYML009C-A 327 nt3.51□□□□□ -1.85
SSL2Q00578 DSF2YBR007C 2211 nt3.51□□□□□ -1.85
SSL2Q00578 GCN1YGL195W 8019 nt3.5□□□□□ -1.85
SSL2Q00578 VAC8YEL013W 1737 nt3.5□□□□□ -1.85
SSL2Q00578 YAK1YJL141C 2424 nt3.5□□□□□ -1.85
SSL2Q00578 GWT1YJL091C 1473 nt3.5□□□□□ -1.85
SSL2Q00578 MAM33YIL070C 801 nt3.5□□□□□ -1.85
SSL2Q00578 YAL037WYAL037W 804 nt3.5□□□□□ -1.85
SSL2Q00578 YKL118WYKL118W 312 nt3.5□□□□□ -1.85
SSL2Q00578 RSF2YJR127C 4143 nt3.5□□□□□ -1.85
SSL2Q00578 BEM4YPL161C 1902 nt3.5□□□□□ -1.85
SSL2Q00578 MAK5YBR142W 2322 nt3.49□□□□□ -1.85
SSL2Q00578 COP1YDL145C 3606 nt3.49□□□□□ -1.85
SSL2Q00578 ARF1YDL192W 546 nt3.49□□□□□ -1.85
SSL2Q00578 AIM11YER093C-A 414 nt3.49□□□□□ -1.85
SSL2Q00578 YER137W-AYER137W-A 306 nt3.49□□□□□ -1.85
SSL2Q00578 SUP56tL(CAA)A 82 nt3.49□□□□□ -1.85
SSL2Q00578 SUP53tL(CAA)C 82 nt3.49□□□□□ -1.85
SSL2Q00578 tL(CAA)DtL(CAA)D 82 nt3.49□□□□□ -1.85
SSL2Q00578 tL(CAA)G1tL(CAA)G1 82 nt3.49□□□□□ -1.85
SSL2Q00578 SUP54tL(CAA)G2 82 nt3.49□□□□□ -1.85
SSL2Q00578 tL(CAA)G3tL(CAA)G3 82 nt3.49□□□□□ -1.85
SSL2Q00578 tL(CAA)KtL(CAA)K 82 nt3.49□□□□□ -1.85
SSL2Q00578 tL(CAA)LtL(CAA)L 82 nt3.49□□□□□ -1.85
SSL2Q00578 tL(CAA)MtL(CAA)M 82 nt3.49□□□□□ -1.85
SSL2Q00578 tL(CAA)NtL(CAA)N 82 nt3.49□□□□□ -1.85
SSL2Q00578 YGR035CYGR035C 351 nt3.49□□□□□ -1.85
SSL2Q00578 TCD1YHR003C 1290 nt3.49□□□□□ -1.85
SSL2Q00578 TEN1YLR010C 483 nt3.49□□□□□ -1.85
SSL2Q00578 ARV1YLR242C 966 nt3.49□□□□□ -1.85
SSL2Q00578 DYN3YMR299C 939 nt3.49□□□□□ -1.85
SSL2Q00578 YNL146C-AYNL146C-A 195 nt3.49□□□□□ -1.85
SSL2Q00578 ROX1YPR065W 1107 nt3.49□□□□□ -1.85
SSL2Q00578 YBR209WYBR209W 318 nt3.49□□□□□ -1.85
SSL2Q00578 RAD5YLR032W 3510 nt3.49□□□□□ -1.85
SSL2Q00578 YNL193WYNL193W 1677 nt3.49□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 55.5 ms