Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 HOT1YMR172W 2160 nt4.6□□□□□ -1.67
CAF120P53836 MFA1YDR461W 111 nt4.6□□□□□ -1.67
CAF120P53836 ECM34YHL043W 513 nt4.6□□□□□ -1.67
CAF120P53836 SGN1YIR001C 753 nt4.6□□□□□ -1.67
CAF120P53836 YMR172C-AYMR172C-A 384 nt4.6□□□□□ -1.67
CAF120P53836 YPL278CYPL278C 303 nt4.6□□□□□ -1.67
CAF120P53836 HOYDL227C 1761 nt4.6□□□□□ -1.67
CAF120P53836 RPC11YDR045C 333 nt4.59□□□□□ -1.67
CAF120P53836 SUP56tL(CAA)A 82 nt4.59□□□□□ -1.67
CAF120P53836 SUP53tL(CAA)C 82 nt4.59□□□□□ -1.67
CAF120P53836 tL(CAA)DtL(CAA)D 82 nt4.59□□□□□ -1.67
CAF120P53836 tL(CAA)G1tL(CAA)G1 82 nt4.59□□□□□ -1.67
CAF120P53836 SUP54tL(CAA)G2 82 nt4.59□□□□□ -1.67
CAF120P53836 tL(CAA)G3tL(CAA)G3 82 nt4.59□□□□□ -1.67
CAF120P53836 tL(CAA)KtL(CAA)K 82 nt4.59□□□□□ -1.67
CAF120P53836 tL(CAA)LtL(CAA)L 82 nt4.59□□□□□ -1.67
CAF120P53836 tL(CAA)MtL(CAA)M 82 nt4.59□□□□□ -1.67
CAF120P53836 tL(CAA)NtL(CAA)N 82 nt4.59□□□□□ -1.67
CAF120P53836 KAR2YJL034W 2049 nt4.59□□□□□ -1.67
CAF120P53836 ECM25YJL201W 1800 nt4.59□□□□□ -1.67
CAF120P53836 YLL007CYLL007C 1998 nt4.59□□□□□ -1.67
CAF120P53836 NAM2YLR382C 2685 nt4.59□□□□□ -1.67
CAF120P53836 YOL019W-AYOL019W-A 153 nt4.59□□□□□ -1.67
CAF120P53836 ADP1YCR011C 3150 nt4.59□□□□□ -1.68
CAF120P53836 GSM1YJL103C 1857 nt4.58□□□□□ -1.68
CAF120P53836 FRQ1YDR373W 573 nt4.58□□□□□ -1.68
CAF120P53836 ATP17YDR377W 306 nt4.58□□□□□ -1.68
CAF120P53836 OM14YBR230C 405 nt4.58□□□□□ -1.68
CAF120P53836 YER077CYER077C 2067 nt4.58□□□□□ -1.68
CAF120P53836 COG8YML071C 1824 nt4.58□□□□□ -1.68
CAF120P53836 MDM30YLR368W 1797 nt4.58□□□□□ -1.68
CAF120P53836 MNT4YNR059W 1743 nt4.58□□□□□ -1.68
CAF120P53836 PAU2YEL049W 363 nt4.57□□□□□ -1.68
CAF120P53836 MIC19YFR011C 513 nt4.57□□□□□ -1.68
CAF120P53836 LRE1YCL051W 1752 nt4.57□□□□□ -1.68
CAF120P53836 APC1YNL172W 5247 nt4.57□□□□□ -1.68
CAF120P53836 PDR5YOR153W 4536 nt4.57□□□□□ -1.68
CAF120P53836 YRR1YOR162C 2433 nt4.56□□□□□ -1.68
CAF120P53836 FOX2YKR009C 2703 nt4.56□□□□□ -1.68
CAF120P53836 DSF2YBR007C 2211 nt4.56□□□□□ -1.68
CAF120P53836 RPL35AYDL191W 363 nt4.56□□□□□ -1.68
CAF120P53836 PSF1YDR013W 627 nt4.56□□□□□ -1.68
CAF120P53836 RPS13YDR064W 456 nt4.56□□□□□ -1.68
CAF120P53836 YER066C-AYER066C-A 501 nt4.56□□□□□ -1.68
CAF120P53836 YOR022CYOR022C 2148 nt4.56□□□□□ -1.68
CAF120P53836 YDL180WYDL180W 1644 nt4.56□□□□□ -1.68
CAF120P53836 CRT10YOL063C 2874 nt4.55□□□□□ -1.68
CAF120P53836 OLI1Q0130 231 nt4.55□□□□□ -1.68
CAF120P53836 YIR040CYIR040C 333 nt4.55□□□□□ -1.68
CAF120P53836 YAL065CYAL065C 387 nt4.55□□□□□ -1.68
CAF120P53836 RTC1YOL138C 4026 nt4.55□□□□□ -1.68
CAF120P53836 GMC1YDR506C 1827 nt4.55□□□□□ -1.68
CAF120P53836 PRS5YOL061W 1491 nt4.55□□□□□ -1.68
CAF120P53836 SKG3YLR187W 3081 nt4.54□□□□□ -1.68
CAF120P53836 STE14YDR410C 720 nt4.54□□□□□ -1.68
CAF120P53836 PAU14YIL176C 363 nt4.54□□□□□ -1.68
CAF120P53836 PAU1YJL223C 363 nt4.54□□□□□ -1.68
CAF120P53836 LTP1YPR073C 486 nt4.54□□□□□ -1.68
CAF120P53836 TIF4632YGL049C 2745 nt4.54□□□□□ -1.68
CAF120P53836 YOL019WYOL019W 1656 nt4.54□□□□□ -1.68
CAF120P53836 MPS3YJL019W 2049 nt4.53□□□□□ -1.68
CAF120P53836 RPL29YFR032C-A 180 nt4.53□□□□□ -1.68
CAF120P53836 RPL43BYJR094W-A 279 nt4.53□□□□□ -1.68
CAF120P53836 SAP30YMR263W 606 nt4.53□□□□□ -1.68
CAF120P53836 CTM1YHR109W 1758 nt4.53□□□□□ -1.69
CAF120P53836 ARG2YJL071W 1725 nt4.52□□□□□ -1.69
CAF120P53836 EMI1YDR512C 564 nt4.52□□□□□ -1.69
CAF120P53836 RPL11BYGR085C 525 nt4.52□□□□□ -1.69
CAF120P53836 RDN58-1RDN58-1 158 nt4.52□□□□□ -1.69
CAF120P53836 YBL006W-AYBL006W-A 150 nt4.52□□□□□ -1.69
CAF120P53836 RDN58-2RDN58-2 158 nt4.52□□□□□ -1.69
CAF120P53836 DIB1YPR082C 432 nt4.52□□□□□ -1.69
CAF120P53836 RPL11AYPR102C 525 nt4.52□□□□□ -1.69
CAF120P53836 YPR169W-AYPR169W-A 219 nt4.52□□□□□ -1.69
CAF120P53836 YPR170W-BYPR170W-B 258 nt4.52□□□□□ -1.69
CAF120P53836 MGR1YCL044C 1254 nt4.52□□□□□ -1.69
CAF120P53836 YJL132WYJL132W 2253 nt4.52□□□□□ -1.69
CAF120P53836 DBP6YNR038W 1890 nt4.52□□□□□ -1.69
CAF120P53836 UTP15YMR093W 1542 nt4.51□□□□□ -1.69
CAF120P53836 ROK1YGL171W 1695 nt4.51□□□□□ -1.69
CAF120P53836 TIM8YJR135W-A 264 nt4.51□□□□□ -1.69
CAF120P53836 YOR050CYOR050C 348 nt4.51□□□□□ -1.69
CAF120P53836 MF(ALPHA)1YPL187W 498 nt4.51□□□□□ -1.69
CAF120P53836 YPR136CYPR136C 513 nt4.51□□□□□ -1.69
CAF120P53836 YCL001W-BYCL001W-B 255 nt4.51□□□□□ -1.69
CAF120P53836 GLC3YEL011W 2115 nt4.51□□□□□ -1.69
CAF120P53836 VID22YLR373C 2706 nt4.51□□□□□ -1.69
CAF120P53836 TEL1YBL088C 8364 nt4.5□□□□□ -1.69
CAF120P53836 tF(GAA)QtF(GAA)Q 75 nt4.5□□□□□ -1.69
CAF120P53836 YHL042WYHL042W 453 nt4.5□□□□□ -1.69
CAF120P53836 YIL102CYIL102C 306 nt4.5□□□□□ -1.69
CAF120P53836 YOR381W-AYOR381W-A 168 nt4.5□□□□□ -1.69
CAF120P53836 SSB2YNL209W 1842 nt4.5□□□□□ -1.69
CAF120P53836 TAF5YBR198C 2397 nt4.5□□□□□ -1.69
CAF120P53836 GDE1YPL110C 3672 nt4.5□□□□□ -1.69
CAF120P53836 RIM13YMR154C 2184 nt4.5□□□□□ -1.69
CAF120P53836 APC4YDR118W 1959 nt4.49□□□□□ -1.69
CAF120P53836 ATP25YMR098C 1839 nt4.49□□□□□ -1.69
CAF120P53836 SMI1YGR229C 1518 nt4.49□□□□□ -1.69
CAF120P53836 YMR196WYMR196W 3267 nt4.49□□□□□ -1.69
Retrieved 100 of 7,029 protein–RNA pairs in 101 ms