Protein–RNA interactions for Protein: P42947

YJL107C, Uncharacterized UPF0442 protein YJL107C, yeastyeast

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YJL107CP42947 RPN1YHR027C 2982 nt3.11□□□□□ -1.91
YJL107CP42947 VPS3YDR495C 3036 nt3.11□□□□□ -1.91
YJL107CP42947 tC(GCA)BtC(GCA)B 72 nt3.11□□□□□ -1.91
YJL107CP42947 tC(GCA)GtC(GCA)G 72 nt3.11□□□□□ -1.91
YJL107CP42947 tC(GCA)P1tC(GCA)P1 72 nt3.11□□□□□ -1.91
YJL107CP42947 tC(GCA)P2tC(GCA)P2 72 nt3.11□□□□□ -1.91
YJL107CP42947 VPH2YKL119C 648 nt3.11□□□□□ -1.91
YJL107CP42947 AIM29YKR074W 468 nt3.11□□□□□ -1.91
YJL107CP42947 HRI1YLR301W 735 nt3.11□□□□□ -1.91
YJL107CP42947 YMR013C-AYMR013C-A 150 nt3.11□□□□□ -1.91
YJL107CP42947 RIM9YMR063W 720 nt3.11□□□□□ -1.91
YJL107CP42947 YMR304C-AYMR304C-A 351 nt3.11□□□□□ -1.91
YJL107CP42947 PFY1YOR122C 381 nt3.11□□□□□ -1.91
YJL107CP42947 CAT5YOR125C 702 nt3.11□□□□□ -1.91
YJL107CP42947 MUS81YDR386W 1899 nt3.11□□□□□ -1.91
YJL107CP42947 MSH2YOL090W 2895 nt3.1□□□□□ -1.91
YJL107CP42947 SSE2YBR169C 2082 nt3.1□□□□□ -1.91
YJL107CP42947 LCB4YOR171C 1875 nt3.1□□□□□ -1.91
YJL107CP42947 IRC2YDR112W 309 nt3.1□□□□□ -1.91
YJL107CP42947 YER039C-AYER039C-A 219 nt3.1□□□□□ -1.91
YJL107CP42947 RTT105YER104W 627 nt3.1□□□□□ -1.91
YJL107CP42947 RTR1YER139C 681 nt3.1□□□□□ -1.91
YJL107CP42947 SSN8YNL025C 972 nt3.1□□□□□ -1.91
YJL107CP42947 YOR277CYOR277C 309 nt3.1□□□□□ -1.91
YJL107CP42947 YOR293C-AYOR293C-A 150 nt3.1□□□□□ -1.91
YJL107CP42947 RPL20BYOR312C 519 nt3.1□□□□□ -1.91
YJL107CP42947 ALG14YBR070C 714 nt3.1□□□□□ -1.91
YJL107CP42947 MSH4YFL003C 2637 nt3.1□□□□□ -1.91
YJL107CP42947 PAM1YDR251W 2493 nt3.1□□□□□ -1.91
YJL107CP42947 CWH41YGL027C 2502 nt3.1□□□□□ -1.91
YJL107CP42947 PEX5YDR244W 1839 nt3.09□□□□□ -1.91
YJL107CP42947 PCK1YKR097W 1650 nt3.09□□□□□ -1.91
YJL107CP42947 YNL193WYNL193W 1677 nt3.09□□□□□ -1.91
YJL107CP42947 RCY1YJL204C 2523 nt3.09□□□□□ -1.91
YJL107CP42947 YDR269CYDR269C 324 nt3.09□□□□□ -1.91
YJL107CP42947 EMI1YDR512C 564 nt3.09□□□□□ -1.91
YJL107CP42947 YGL015CYGL015C 393 nt3.09□□□□□ -1.91
YJL107CP42947 MDV1YJL112W 2145 nt3.09□□□□□ -1.91
YJL107CP42947 RPL15AYLR029C 615 nt3.09□□□□□ -1.91
YJL107CP42947 CWC24YLR323C 780 nt3.09□□□□□ -1.91
YJL107CP42947 RPL16BYNL069C 597 nt3.09□□□□□ -1.91
YJL107CP42947 YKR078WYKR078W 1758 nt3.09□□□□□ -1.91
YJL107CP42947 KAP95YLR347C 2586 nt3.08□□□□□ -1.92
YJL107CP42947 YCG1YDR325W 3108 nt3.08□□□□□ -1.92
YJL107CP42947 MYO5YMR109W 3660 nt3.08□□□□□ -1.92
YJL107CP42947 YDL180WYDL180W 1644 nt3.08□□□□□ -1.92
YJL107CP42947 21S_rRNA21S_rRNA 3296 nt3.08□□□□□ -1.92
YJL107CP42947 YCR064CYCR064C 411 nt3.08□□□□□ -1.92
YJL107CP42947 STE14YDR410C 720 nt3.08□□□□□ -1.92
YJL107CP42947 YER079WYER079W 633 nt3.08□□□□□ -1.92
YJL107CP42947 PHD1YKL043W 1101 nt3.08□□□□□ -1.92
YJL107CP42947 TIF11YMR260C 462 nt3.08□□□□□ -1.92
YJL107CP42947 RIO2YNL207W 1278 nt3.08□□□□□ -1.92
YJL107CP42947 PIS1YPR113W 663 nt3.08□□□□□ -1.92
YJL107CP42947 NTC20YBR188C 423 nt3.08□□□□□ -1.92
YJL107CP42947 SSF1YHR066W 1362 nt3.08□□□□□ -1.92
YJL107CP42947 IOC3YFR013W 2364 nt3.08□□□□□ -1.92
YJL107CP42947 YRR1YOR162C 2433 nt3.08□□□□□ -1.92
YJL107CP42947 ENA5YDR038C 3276 nt3.08□□□□□ -1.92
YJL107CP42947 ENA2YDR039C 3276 nt3.08□□□□□ -1.92
YJL107CP42947 ENA1YDR040C 3276 nt3.08□□□□□ -1.92
YJL107CP42947 DBF20YPR111W 1695 nt3.08□□□□□ -1.92
YJL107CP42947 PEX1YKL197C 3132 nt3.07□□□□□ -1.92
YJL107CP42947 GYL1YMR192W 2163 nt3.07□□□□□ -1.92
YJL107CP42947 YAK1YJL141C 2424 nt3.07□□□□□ -1.92
YJL107CP42947 tF(GAA)DtF(GAA)D 73 nt3.07□□□□□ -1.92
YJL107CP42947 tF(GAA)NtF(GAA)N 73 nt3.07□□□□□ -1.92
YJL107CP42947 IRC19YLL033W 693 nt3.07□□□□□ -1.92
YJL107CP42947 CDC123YLR215C 1083 nt3.07□□□□□ -1.92
YJL107CP42947 YOR029WYOR029W 336 nt3.07□□□□□ -1.92
YJL107CP42947 MSS18YPR134W 807 nt3.07□□□□□ -1.92
YJL107CP42947 YMR018WYMR018W 1545 nt3.07□□□□□ -1.92
YJL107CP42947 EAP1YKL204W 1899 nt3.07□□□□□ -1.92
YJL107CP42947 BI4Q0120 1917 nt3.07□□□□□ -1.92
YJL107CP42947 PPN1YDR452W 2025 nt3.07□□□□□ -1.92
YJL107CP42947 YDR338CYDR338C 2088 nt3.07□□□□□ -1.92
YJL107CP42947 FRE8YLR047C 2061 nt3.07□□□□□ -1.92
YJL107CP42947 YDR061WYDR061W 1620 nt3.06□□□□□ -1.92
YJL107CP42947 HEH2YDR458C 1992 nt3.06□□□□□ -1.92
YJL107CP42947 EPL1YFL024C 2499 nt3.06□□□□□ -1.92
YJL107CP42947 TPM2YIL138C 486 nt3.06□□□□□ -1.92
YJL107CP42947 YIR040CYIR040C 333 nt3.06□□□□□ -1.92
YJL107CP42947 EMP70YLR083C 2004 nt3.06□□□□□ -1.92
YJL107CP42947 YAR047CYAR047C 321 nt3.06□□□□□ -1.92
YJL107CP42947 COX8YLR395C 237 nt3.06□□□□□ -1.92
YJL107CP42947 YML108WYML108W 318 nt3.06□□□□□ -1.92
YJL107CP42947 SFM1YOR021C 642 nt3.06□□□□□ -1.92
YJL107CP42947 MRPL40YPL173W 894 nt3.06□□□□□ -1.92
YJL107CP42947 UBP14YBR058C 2346 nt3.05□□□□□ -1.92
YJL107CP42947 ATG13YPR185W 2217 nt3.05□□□□□ -1.92
YJL107CP42947 YER087C-AYER087C-A 552 nt3.05□□□□□ -1.92
YJL107CP42947 RPB9YGL070C 369 nt3.05□□□□□ -1.92
YJL107CP42947 YLR101CYLR101C 396 nt3.05□□□□□ -1.92
YJL107CP42947 APC9YLR102C 798 nt3.05□□□□□ -1.92
YJL107CP42947 PDR17YNL264C 1053 nt3.05□□□□□ -1.92
YJL107CP42947 YOL159CYOL159C 516 nt3.05□□□□□ -1.92
YJL107CP42947 YBR012CYBR012C 420 nt3.05□□□□□ -1.92
YJL107CP42947 YBR076C-AYBR076C-A 267 nt3.05□□□□□ -1.92
YJL107CP42947 snR54snR54 86 nt3.05□□□□□ -1.92
YJL107CP42947 YSP2YDR326C 4317 nt3.05□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 17.5 ms