Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.791e-7■□□□□ 10
XRCC6P12956 HJURP-208ENST00000453122 634 ntTSL 418.69■□□□□ 0.581e-7■□□□□ 10
XRCC6P12956 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.511e-7■□□□□ 10
XRCC6P12956 NME1-209ENST00000511355 1645 ntTSL 5 BASIC17.13■□□□□ 0.331e-7■□□□□ 10
XRCC6P12956 NME1-206ENST00000475573 781 ntTSL 316.72■□□□□ 0.271e-7■□□□□ 10
XRCC6P12956 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.141e-7■□□□□ 10
XRCC6P12956 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.081e-7■□□□□ 10
XRCC6P12956 NME1-NME2-201ENST00000376392 894 ntTSL 5 BASIC15.1■□□□□ 0.011e-7■□□□□ 10
XRCC6P12956 HJURP-209ENST00000454020 806 ntTSL 513.59□□□□□ -0.231e-7■□□□□ 10
XRCC6P12956 PA2G4-206ENST00000552766 1085 ntTSL 5 BASIC13.05□□□□□ -0.321e-7■□□□□ 10
XRCC6P12956 NME1-201ENST00000013034 796 ntTSL 3 BASIC12.3□□□□□ -0.441e-7■□□□□ 10
XRCC6P12956 HMGN2-202ENST00000460563 1045 ntTSL 511.91□□□□□ -0.51e-14■□□□□ 10
XRCC6P12956 HMGN2-204ENST00000464888 565 ntTSL 211.73□□□□□ -0.531e-14■□□□□ 10
XRCC6P12956 KIF2C-205ENST00000455186 908 ntTSL 511.32□□□□□ -0.61e-7■□□□□ 10
XRCC6P12956 KIF2C-204ENST00000452259 1124 ntTSL 510.14□□□□□ -0.791e-7■□□□□ 10
XRCC6P12956 HMGN2-203ENST00000463817 853 ntTSL 29.7□□□□□ -0.861e-14■□□□□ 10
XRCC6P12956 HMGN2-208ENST00000479815 1030 ntTSL 59.7□□□□□ -0.861e-14■□□□□ 10
XRCC6P12956 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.861e-7■□□□□ 10
XRCC6P12956 HMGN2-206ENST00000467700 932 ntTSL 28.41□□□□□ -1.061e-14■□□□□ 10
XRCC6P12956 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.171e-14■□□□□ 10
XRCC6P12956 HMGN2-207ENST00000468388 320 ntTSL 37.76□□□□□ -1.171e-14■□□□□ 10
XRCC6P12956 KIF2C-208ENST00000493027 1091 ntTSL 56.98□□□□□ -1.291e-7■□□□□ 10
XRCC6P12956 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.431e-14■□□□□ 10
XRCC6P12956 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.531e-7■□□□□ 10
XRCC6P12956 PTCD3-214ENST00000483925 576 ntTSL 34.89□□□□□ -1.631e-7■□□□□ 10
XRCC6P12956 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.142e-19■□□□□ 10
XRCC6P12956 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.37■■□□□ 1.012e-19■□□□□ 10
XRCC6P12956 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.332e-19■□□□□ 10
XRCC6P12956 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.052e-19■□□□□ 10
XRCC6P12956 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.052e-19■□□□□ 10
XRCC6P12956 SLC25A3-214ENST00000551123 1417 ntTSL 1 (best)13.8□□□□□ -0.22e-19■□□□□ 10
XRCC6P12956 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC13.77□□□□□ -0.212e-19■□□□□ 10
XRCC6P12956 SLC25A3-203ENST00000401722 6087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.392e-19■□□□□ 10
XRCC6P12956 SLC25A3-204ENST00000546766 3236 ntTSL 1 (best)12.44□□□□□ -0.422e-19■□□□□ 10
XRCC6P12956 SNORA53-201ENST00000391141 249 ntBASIC2.45□□□□□ -2.022e-19■□□□□ 10
XRCC6P12956 SCARNA9-201ENST00000530422 353 ntBASIC8.4□□□□□ -1.064e-34■□□□□ 10
XRCC6P12956 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.354e-34■□□□□ 10
XRCC6P12956 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.56□□□□□ -1.524e-34■□□□□ 10
XRCC6P12956 CEP295-203ENST00000530425 1735 ntAPPRIS ALT2 TSL 43.61□□□□□ -1.834e-34■□□□□ 10
XRCC6P12956 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC28.48■■■□□ 2.158e-7■□□□□ 10
XRCC6P12956 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.978e-7■□□□□ 10
XRCC6P12956 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.3■■□□□ 1.488e-7■□□□□ 10
XRCC6P12956 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.59■□□□□ 0.738e-7■□□□□ 10
XRCC6P12956 TANGO2-222ENST00000479679 894 ntTSL 226.96■■□□□ 1.916e-9■□□□□ 9.9
XRCC6P12956 TANGO2-206ENST00000411907 568 ntTSL 424.58■■□□□ 1.536e-9■□□□□ 9.9
XRCC6P12956 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC21.65■■□□□ 1.066e-9■□□□□ 9.9
XRCC6P12956 TANGO2-216ENST00000450664 570 ntTSL 419.06■□□□□ 0.646e-9■□□□□ 9.9
XRCC6P12956 TANGO2-219ENST00000471707 745 ntTSL 517.78■□□□□ 0.446e-9■□□□□ 9.9
XRCC6P12956 KNOP1-203ENST00000565844 1394 ntTSL 517.01■□□□□ 0.316e-9■□□□□ 9.9
XRCC6P12956 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.286e-9■□□□□ 9.9
XRCC6P12956 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.096e-9■□□□□ 9.9
XRCC6P12956 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.036e-9■□□□□ 9.9
XRCC6P12956 TANGO2-223ENST00000484373 3109 ntTSL 415.06■□□□□ 06e-9■□□□□ 9.9
XRCC6P12956 HERC1-214ENST00000561400 2215 ntTSL 213.49□□□□□ -0.256e-9■□□□□ 9.9
XRCC6P12956 CTNNB1-204ENST00000405570 2513 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.356e-9■□□□□ 9.9
XRCC6P12956 CTNNB1-206ENST00000431914 634 ntTSL 412.51□□□□□ -0.416e-9■□□□□ 9.9
XRCC6P12956 KNOP1-201ENST00000219837 6432 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.456e-9■□□□□ 9.9
XRCC6P12956 CTNNB1-207ENST00000433400 596 ntTSL 46.7□□□□□ -1.346e-9■□□□□ 9.9
XRCC6P12956 CTNNB1-205ENST00000426215 563 ntTSL 44.69□□□□□ -1.666e-9■□□□□ 9.9
XRCC6P12956 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.291e-11■□□□□ 9.9
XRCC6P12956 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.12■□□□□ 0.171e-11■□□□□ 9.9
XRCC6P12956 PCBP2-201ENST00000359282 1730 ntTSL 1 (best) BASIC15.15■□□□□ 0.021e-11■□□□□ 9.9
XRCC6P12956 PCBP2-203ENST00000437231 3026 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.221e-11■□□□□ 9.9
XRCC6P12956 PCBP2-205ENST00000447282 3077 ntTSL 5 BASIC13.41□□□□□ -0.261e-11■□□□□ 9.9
XRCC6P12956 AC023509.1-201ENST00000547717 1571 ntTSL 2 BASIC12.85□□□□□ -0.351e-11■□□□□ 9.9
XRCC6P12956 PCBP2-212ENST00000548190 581 ntTSL 512.82□□□□□ -0.361e-11■□□□□ 9.9
XRCC6P12956 PCBP2-208ENST00000546652 823 ntTSL 512.73□□□□□ -0.371e-11■□□□□ 9.9
XRCC6P12956 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.421e-11■□□□□ 9.9
XRCC6P12956 PCBP2-204ENST00000439930 1296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.471e-11■□□□□ 9.9
XRCC6P12956 PCBP2-217ENST00000550520 753 ntTSL 312.11□□□□□ -0.471e-11■□□□□ 9.9
XRCC6P12956 PCBP2-226ENST00000562264 1145 ntTSL 512.11□□□□□ -0.471e-11■□□□□ 9.9
XRCC6P12956 PCBP2-218ENST00000550585 2543 ntTSL 511.65□□□□□ -0.541e-11■□□□□ 9.9
XRCC6P12956 PCBP2-223ENST00000552819 1418 ntAPPRIS ALT1 TSL 2 BASIC11.48□□□□□ -0.571e-11■□□□□ 9.9
XRCC6P12956 PCBP2-207ENST00000546463 1457 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.721e-11■□□□□ 9.9
XRCC6P12956 PCBP2-213ENST00000548933 1202 ntTSL 1 (best) BASIC10.11□□□□□ -0.791e-11■□□□□ 9.9
XRCC6P12956 PCBP2-222ENST00000552296 1342 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.831e-11■□□□□ 9.9
XRCC6P12956 PCBP2-211ENST00000547987 681 ntTSL 39.86□□□□□ -0.831e-11■□□□□ 9.9
XRCC6P12956 PCBP2-221ENST00000551104 681 ntTSL 39.43□□□□□ -0.91e-11■□□□□ 9.9
XRCC6P12956 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.19□□□□□ -1.581e-6■□□□□ 9.9
XRCC6P12956 NMT1-211ENST00000591931 748 ntTSL 219.33■□□□□ 0.683e-6■□□□□ 9.9
XRCC6P12956 NMT1-213ENST00000592782 4999 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.13e-6■□□□□ 9.9
XRCC6P12956 NMT1-201ENST00000258960 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.573e-6■□□□□ 9.9
XRCC6P12956 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.53e-10■□□□□ 9.9
XRCC6P12956 CSNK1D-221ENST00000582844 957 ntTSL 523.69■■□□□ 1.383e-10■□□□□ 9.9
XRCC6P12956 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.38■□□□□ 0.693e-10■□□□□ 9.9
XRCC6P12956 CSNK1D-205ENST00000403276 1040 ntTSL 218.69■□□□□ 0.583e-10■□□□□ 9.9
XRCC6P12956 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.453e-10■□□□□ 9.9
XRCC6P12956 CSNK1D-223ENST00000584472 586 ntTSL 417.77■□□□□ 0.443e-10■□□□□ 9.9
XRCC6P12956 CSNK1D-217ENST00000581241 6094 ntTSL 216.71■□□□□ 0.273e-10■□□□□ 9.9
XRCC6P12956 CSNK1D-211ENST00000579316 692 ntTSL 215.19■□□□□ 0.023e-10■□□□□ 9.9
XRCC6P12956 CSNK1D-219ENST00000581660 611 ntTSL 515.19■□□□□ 0.023e-10■□□□□ 9.9
XRCC6P12956 CSNK1D-213ENST00000580446 612 ntTSL 315.12■□□□□ 0.013e-10■□□□□ 9.9
XRCC6P12956 CSNK1D-207ENST00000578194 567 ntTSL 414.18□□□□□ -0.143e-10■□□□□ 9.9
XRCC6P12956 CSNK1D-218ENST00000581655 549 ntTSL 413.76□□□□□ -0.213e-10■□□□□ 9.9
XRCC6P12956 CSNK1D-226ENST00000585026 563 ntTSL 511.87□□□□□ -0.513e-10■□□□□ 9.9
XRCC6P12956 CSNK1D-210ENST00000579308 598 ntTSL 211.85□□□□□ -0.513e-10■□□□□ 9.9
XRCC6P12956 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.83e-10■□□□□ 9.9
XRCC6P12956 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.973e-10■□□□□ 9.9
XRCC6P12956 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.993e-10■□□□□ 9.9
XRCC6P12956 CYBRD1-204ENST00000445146 682 ntTSL 319.85■□□□□ 0.773e-9■□□□□ 9.9
Retrieved 100 of 6,788 protein–RNA pairs in 234.5 ms