Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 ULP1YPL020C 1866 nt4.77□□□□□ -1.65
TY1A-PR2P0CX60 GAC1YOR178C 2382 nt4.77□□□□□ -1.65
TY1A-PR2P0CX60 TFB5YDR079C-A 219 nt4.77□□□□□ -1.65
TY1A-PR2P0CX60 tF(GAA)QtF(GAA)Q 75 nt4.77□□□□□ -1.65
TY1A-PR2P0CX60 ECT1YGR007W 972 nt4.77□□□□□ -1.65
TY1A-PR2P0CX60 YBL028CYBL028C 321 nt4.77□□□□□ -1.65
TY1A-PR2P0CX60 SOK2YMR016C 2358 nt4.77□□□□□ -1.65
TY1A-PR2P0CX60 PIN4YBL051C 2007 nt4.77□□□□□ -1.65
TY1A-PR2P0CX60 MIP6YHR015W 1980 nt4.76□□□□□ -1.65
TY1A-PR2P0CX60 YLL007CYLL007C 1998 nt4.76□□□□□ -1.65
TY1A-PR2P0CX60 YTA6YPL074W 2265 nt4.76□□□□□ -1.65
TY1A-PR2P0CX60 AIM46YHR199C 933 nt4.76□□□□□ -1.65
TY1A-PR2P0CX60 TIM8YJR135W-A 264 nt4.76□□□□□ -1.65
TY1A-PR2P0CX60 NTC20YBR188C 423 nt4.76□□□□□ -1.65
TY1A-PR2P0CX60 OAF3YKR064W 2592 nt4.76□□□□□ -1.65
TY1A-PR2P0CX60 DPB11YJL090C 2295 nt4.76□□□□□ -1.65
TY1A-PR2P0CX60 ELM1YKL048C 1923 nt4.76□□□□□ -1.65
TY1A-PR2P0CX60 SSP1YHR184W 1716 nt4.75□□□□□ -1.65
TY1A-PR2P0CX60 EPO1YMR124W 2832 nt4.75□□□□□ -1.65
TY1A-PR2P0CX60 FLC1YPL221W 2382 nt4.75□□□□□ -1.65
TY1A-PR2P0CX60 ATP25YMR098C 1839 nt4.74□□□□□ -1.65
TY1A-PR2P0CX60 VID30YGL227W 2877 nt4.74□□□□□ -1.65
TY1A-PR2P0CX60 RPS24AYER074W 408 nt4.74□□□□□ -1.65
TY1A-PR2P0CX60 SUP19tS(UGA)E 82 nt4.74□□□□□ -1.65
TY1A-PR2P0CX60 SUP17tS(UGA)I 82 nt4.74□□□□□ -1.65
TY1A-PR2P0CX60 SUP16tS(UGA)P 82 nt4.74□□□□□ -1.65
TY1A-PR2P0CX60 YHR217CYHR217C 462 nt4.74□□□□□ -1.65
TY1A-PR2P0CX60 KEX1YGL203C 2190 nt4.74□□□□□ -1.65
TY1A-PR2P0CX60 GLN4YOR168W 2430 nt4.73□□□□□ -1.65
TY1A-PR2P0CX60 BIT61YJL058C 1632 nt4.73□□□□□ -1.65
TY1A-PR2P0CX60 YOR381W-AYOR381W-A 168 nt4.73□□□□□ -1.65
TY1A-PR2P0CX60 SRP68YPL243W 1800 nt4.73□□□□□ -1.65
TY1A-PR2P0CX60 YHR078WYHR078W 1659 nt4.73□□□□□ -1.65
TY1A-PR2P0CX60 MES1YGR264C 2256 nt4.72□□□□□ -1.65
TY1A-PR2P0CX60 YAP1802YGR241C 1707 nt4.72□□□□□ -1.65
TY1A-PR2P0CX60 ISW2YOR304W 3363 nt4.72□□□□□ -1.65
TY1A-PR2P0CX60 RPS23AYGR118W 438 nt4.72□□□□□ -1.65
TY1A-PR2P0CX60 RPS22BYLR367W 393 nt4.72□□□□□ -1.65
TY1A-PR2P0CX60 YMR105W-AYMR105W-A 195 nt4.72□□□□□ -1.65
TY1A-PR2P0CX60 SWC3YAL011W 1878 nt4.72□□□□□ -1.65
TY1A-PR2P0CX60 REB1YBR049C 2433 nt4.72□□□□□ -1.65
TY1A-PR2P0CX60 NHA1YLR138W 2958 nt4.71□□□□□ -1.65
TY1A-PR2P0CX60 PHO2YDL106C 1680 nt4.71□□□□□ -1.66
TY1A-PR2P0CX60 PSF1YDR013W 627 nt4.71□□□□□ -1.66
TY1A-PR2P0CX60 OM45YIL136W 1182 nt4.71□□□□□ -1.66
TY1A-PR2P0CX60 ATP15YPL271W 189 nt4.71□□□□□ -1.66
TY1A-PR2P0CX60 MCH4YOL119C 1506 nt4.71□□□□□ -1.66
TY1A-PR2P0CX60 SRB4YER022W 2064 nt4.71□□□□□ -1.66
TY1A-PR2P0CX60 EBS1YDR206W 2655 nt4.7□□□□□ -1.66
TY1A-PR2P0CX60 LHP1YDL051W 828 nt4.7□□□□□ -1.66
TY1A-PR2P0CX60 ASK10YGR097W 3441 nt4.69□□□□□ -1.66
TY1A-PR2P0CX60 DAP2YHR028C 2457 nt4.69□□□□□ -1.66
TY1A-PR2P0CX60 AIM9YER080W 1884 nt4.69□□□□□ -1.66
TY1A-PR2P0CX60 MAK31YCR020C-A 267 nt4.69□□□□□ -1.66
TY1A-PR2P0CX60 SNU13YEL026W 381 nt4.69□□□□□ -1.66
TY1A-PR2P0CX60 INA22YIR024C 651 nt4.69□□□□□ -1.66
TY1A-PR2P0CX60 LSM1YJL124C 519 nt4.69□□□□□ -1.66
TY1A-PR2P0CX60 RFC3YNL290W 1023 nt4.69□□□□□ -1.66
TY1A-PR2P0CX60 YPL062WYPL062W 405 nt4.69□□□□□ -1.66
TY1A-PR2P0CX60 YBR224WYBR224W 516 nt4.69□□□□□ -1.66
TY1A-PR2P0CX60 CAF4YKR036C 1932 nt4.69□□□□□ -1.66
TY1A-PR2P0CX60 YJL206CYJL206C 2277 nt4.69□□□□□ -1.66
TY1A-PR2P0CX60 SPT10YJL127C 1923 nt4.68□□□□□ -1.66
TY1A-PR2P0CX60 YER091C-AYER091C-A 222 nt4.68□□□□□ -1.66
TY1A-PR2P0CX60 SMD1YGR074W 441 nt4.68□□□□□ -1.66
TY1A-PR2P0CX60 YPL182CYPL182C 384 nt4.68□□□□□ -1.66
TY1A-PR2P0CX60 MMP1YLL061W 1752 nt4.68□□□□□ -1.66
TY1A-PR2P0CX60 SED4YCR067C 3198 nt4.67□□□□□ -1.66
TY1A-PR2P0CX60 AVT1YJR001W 1809 nt4.67□□□□□ -1.66
TY1A-PR2P0CX60 CCT7YJL111W 1653 nt4.67□□□□□ -1.66
TY1A-PR2P0CX60 YHR218W-AYHR218W-A 318 nt4.67□□□□□ -1.66
TY1A-PR2P0CX60 YBL112CYBL112C 318 nt4.67□□□□□ -1.66
TY1A-PR2P0CX60 RDH54YBR073W 2877 nt4.67□□□□□ -1.66
TY1A-PR2P0CX60 UBP12YJL197W 3765 nt4.67□□□□□ -1.66
TY1A-PR2P0CX60 HBT1YDL223C 3141 nt4.67□□□□□ -1.66
TY1A-PR2P0CX60 CHL1YPL008W 2586 nt4.66□□□□□ -1.66
TY1A-PR2P0CX60 snR60snR60 104 nt4.66□□□□□ -1.66
TY1A-PR2P0CX60 YFR035CYFR035C 345 nt4.66□□□□□ -1.66
TY1A-PR2P0CX60 RPS0AYGR214W 759 nt4.66□□□□□ -1.66
TY1A-PR2P0CX60 RRT15YLR162W-A 189 nt4.66□□□□□ -1.66
TY1A-PR2P0CX60 snR52snR52 92 nt4.66□□□□□ -1.66
TY1A-PR2P0CX60 NAM2YLR382C 2685 nt4.66□□□□□ -1.66
TY1A-PR2P0CX60 ALR2YFL050C 2577 nt4.65□□□□□ -1.66
TY1A-PR2P0CX60 MNR2YKL064W 2910 nt4.65□□□□□ -1.66
TY1A-PR2P0CX60 tT(UGU)Q1tT(UGU)Q1 76 nt4.65□□□□□ -1.67
TY1A-PR2P0CX60 YMR295CYMR295C 594 nt4.65□□□□□ -1.67
TY1A-PR2P0CX60 YFL034WYFL034W 3222 nt4.65□□□□□ -1.67
TY1A-PR2P0CX60 BUL1YMR275C 2931 nt4.65□□□□□ -1.67
TY1A-PR2P0CX60 KIN4YOR233W 2403 nt4.64□□□□□ -1.67
TY1A-PR2P0CX60 YJL020W-AYJL020W-A 258 nt4.64□□□□□ -1.67
TY1A-PR2P0CX60 PCC1YKR095W-A 267 nt4.64□□□□□ -1.67
TY1A-PR2P0CX60 ECM16YMR128W 3804 nt4.64□□□□□ -1.67
TY1A-PR2P0CX60 YNL028WYNL028W 318 nt4.64□□□□□ -1.67
TY1A-PR2P0CX60 RPS9AYPL081W 594 nt4.64□□□□□ -1.67
TY1A-PR2P0CX60 AFT1YGL071W 2073 nt4.64□□□□□ -1.67
TY1A-PR2P0CX60 CLF1YLR117C 2064 nt4.64□□□□□ -1.67
TY1A-PR2P0CX60 PEX5YDR244W 1839 nt4.64□□□□□ -1.67
TY1A-PR2P0CX60 MNL1YHR204W 2391 nt4.64□□□□□ -1.67
TY1A-PR2P0CX60 PSE1YMR308C 3270 nt4.64□□□□□ -1.67
TY1A-PR2P0CX60 TUB2YFL037W 1374 nt4.64□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 155.9 ms