Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 YGL177WYGL177W 348 nt2.26□□□□□ -2.05
RAD3P06839 MIG2YGL209W 1149 nt2.26□□□□□ -2.05
RAD3P06839 RPL36AYMR194W 303 nt2.26□□□□□ -2.05
RAD3P06839 MBA1YBR185C 837 nt2.26□□□□□ -2.05
RAD3P06839 CLN3YAL040C 1743 nt2.25□□□□□ -2.05
RAD3P06839 NPR3YHL023C 3441 nt2.25□□□□□ -2.05
RAD3P06839 YFH1YDL120W 525 nt2.25□□□□□ -2.05
RAD3P06839 YRB1YDR002W 606 nt2.25□□□□□ -2.05
RAD3P06839 PIB1YDR313C 861 nt2.25□□□□□ -2.05
RAD3P06839 YNL089CYNL089C 477 nt2.25□□□□□ -2.05
RAD3P06839 YPR014CYPR014C 330 nt2.25□□□□□ -2.05
RAD3P06839 RPC40YPR110C 1008 nt2.25□□□□□ -2.05
RAD3P06839 NEO1YIL048W 3456 nt2.25□□□□□ -2.05
RAD3P06839 YBP2YGL060W 1926 nt2.25□□□□□ -2.05
RAD3P06839 MGM1YOR211C 2646 nt2.24□□□□□ -2.05
RAD3P06839 HOS4YIL112W 3252 nt2.24□□□□□ -2.05
RAD3P06839 YCT1YLL055W 1596 nt2.24□□□□□ -2.05
RAD3P06839 ASI3YNL008C 2031 nt2.24□□□□□ -2.05
RAD3P06839 FUS1YCL027W 1539 nt2.24□□□□□ -2.05
RAD3P06839 snR76snR76 109 nt2.24□□□□□ -2.05
RAD3P06839 GIC2YDR309C 1152 nt2.24□□□□□ -2.05
RAD3P06839 RTS3YGR161C 792 nt2.24□□□□□ -2.05
RAD3P06839 MVB12YGR206W 306 nt2.24□□□□□ -2.05
RAD3P06839 PSF2YJL072C 642 nt2.24□□□□□ -2.05
RAD3P06839 YJL202CYJL202C 348 nt2.24□□□□□ -2.05
RAD3P06839 FAR3YMR052W 615 nt2.24□□□□□ -2.05
RAD3P06839 MRPL17YNL252C 846 nt2.24□□□□□ -2.05
RAD3P06839 HUA2YOR284W 732 nt2.24□□□□□ -2.05
RAD3P06839 MAL33YBR297W 1407 nt2.24□□□□□ -2.05
RAD3P06839 SRB4YER022W 2064 nt2.24□□□□□ -2.05
RAD3P06839 YEL1YBL060W 2064 nt2.24□□□□□ -2.05
RAD3P06839 YJL049WYJL049W 1353 nt2.23□□□□□ -2.05
RAD3P06839 INP53YOR109W 3324 nt2.23□□□□□ -2.05
RAD3P06839 PUF4YGL014W 2667 nt2.23□□□□□ -2.05
RAD3P06839 ROY1YMR258C 1662 nt2.23□□□□□ -2.05
RAD3P06839 SRD1YCR018C 666 nt2.23□□□□□ -2.05
RAD3P06839 YGR111WYGR111W 1203 nt2.23□□□□□ -2.05
RAD3P06839 NYV1YLR093C 762 nt2.23□□□□□ -2.05
RAD3P06839 DIA1YMR316W 1011 nt2.23□□□□□ -2.05
RAD3P06839 YIP3YNL044W 531 nt2.23□□□□□ -2.05
RAD3P06839 YOL038C-AYOL038C-A 96 nt2.23□□□□□ -2.05
RAD3P06839 AGC1YPR021C 2709 nt2.23□□□□□ -2.05
RAD3P06839 HRD3YLR207W 2502 nt2.23□□□□□ -2.05
RAD3P06839 INP51YIL002C 2841 nt2.23□□□□□ -2.05
RAD3P06839 YDL118WYDL118W 381 nt2.22□□□□□ -2.05
RAD3P06839 YJL052C-AYJL052C-A 120 nt2.22□□□□□ -2.05
RAD3P06839 PET191YJR034W 327 nt2.22□□□□□ -2.05
RAD3P06839 VPS51YKR020W 495 nt2.22□□□□□ -2.05
RAD3P06839 YML094C-AYML094C-A 402 nt2.22□□□□□ -2.05
RAD3P06839 YBL062WYBL062W 381 nt2.22□□□□□ -2.05
RAD3P06839 NTC20YBR188C 423 nt2.22□□□□□ -2.05
RAD3P06839 RGL1YPL066W 1440 nt2.22□□□□□ -2.05
RAD3P06839 FUS2YMR232W 2034 nt2.22□□□□□ -2.05
RAD3P06839 PUT3YKL015W 2940 nt2.21□□□□□ -2.05
RAD3P06839 PIG2YIL045W 1617 nt2.21□□□□□ -2.06
RAD3P06839 GIS1YDR096W 2685 nt2.21□□□□□ -2.06
RAD3P06839 TVP15YDR100W 432 nt2.21□□□□□ -2.06
RAD3P06839 YEL010WYEL010W 351 nt2.21□□□□□ -2.06
RAD3P06839 YER107W-AYER107W-A 321 nt2.21□□□□□ -2.06
RAD3P06839 CUP1-1YHR053C 186 nt2.21□□□□□ -2.06
RAD3P06839 CUP1-2YHR055C 186 nt2.21□□□□□ -2.06
RAD3P06839 KSP1YHR082C 3090 nt2.21□□□□□ -2.06
RAD3P06839 YJL032WYJL032W 315 nt2.21□□□□□ -2.06
RAD3P06839 VPH2YKL119C 648 nt2.21□□□□□ -2.06
RAD3P06839 MRP49YKL167C 414 nt2.21□□□□□ -2.06
RAD3P06839 HYM1YKL189W 1200 nt2.21□□□□□ -2.06
RAD3P06839 YNL046WYNL046W 519 nt2.21□□□□□ -2.06
RAD3P06839 TYE7YOR344C 876 nt2.21□□□□□ -2.06
RAD3P06839 DIS3YOL021C 3006 nt2.21□□□□□ -2.06
RAD3P06839 RLF2YPR018W 1821 nt2.21□□□□□ -2.06
RAD3P06839 YDR034C-CYDR034C-C 1317 nt2.2□□□□□ -2.06
RAD3P06839 YLR410W-AYLR410W-A 1317 nt2.2□□□□□ -2.06
RAD3P06839 KAR1YNL188W 1302 nt2.2□□□□□ -2.06
RAD3P06839 MRPL32YCR003W 552 nt2.2□□□□□ -2.06
RAD3P06839 BUD26YDR241W 288 nt2.2□□□□□ -2.06
RAD3P06839 MAM1YER106W 909 nt2.2□□□□□ -2.06
RAD3P06839 MPO1YGL010W 525 nt2.2□□□□□ -2.06
RAD3P06839 YGL117WYGL117W 798 nt2.2□□□□□ -2.06
RAD3P06839 RNP1YLL046C 750 nt2.2□□□□□ -2.06
RAD3P06839 UBC12YLR306W 567 nt2.2□□□□□ -2.06
RAD3P06839 IRC21YMR073C 606 nt2.2□□□□□ -2.06
RAD3P06839 RGM1YMR182C 636 nt2.2□□□□□ -2.06
RAD3P06839 YMR320WYMR320W 306 nt2.2□□□□□ -2.06
RAD3P06839 AFI1YOR129C 2682 nt2.2□□□□□ -2.06
RAD3P06839 RGA2YDR379W 3030 nt2.2□□□□□ -2.06
RAD3P06839 SHR3YDL212W 633 nt2.19□□□□□ -2.06
RAD3P06839 KEI1YDR367W 666 nt2.19□□□□□ -2.06
RAD3P06839 GPI19YDR437W 423 nt2.19□□□□□ -2.06
RAD3P06839 GCN4YEL009C 846 nt2.19□□□□□ -2.06
RAD3P06839 TIM9YEL020W-A 264 nt2.19□□□□□ -2.06
RAD3P06839 RPL22BYFL034C-A 369 nt2.19□□□□□ -2.06
RAD3P06839 GOS1YHL031C 672 nt2.19□□□□□ -2.06
RAD3P06839 YHL048C-AYHL048C-A 135 nt2.19□□□□□ -2.06
RAD3P06839 CMC1YKL137W 336 nt2.19□□□□□ -2.06
RAD3P06839 ESF2YNR054C 951 nt2.19□□□□□ -2.06
RAD3P06839 YAP7YOL028C 738 nt2.19□□□□□ -2.06
RAD3P06839 HEM4YOR278W 828 nt2.19□□□□□ -2.06
RAD3P06839 PSK2YOL045W 3306 nt2.19□□□□□ -2.06
RAD3P06839 SPT14YPL175W 1359 nt2.19□□□□□ -2.06
RAD3P06839 SAP190YKR028W 3102 nt2.18□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 27.8 ms