Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
HAPLN3Q96S86 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.48■■□□□ 1.03
HAPLN3Q96S86 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HAPLN3Q96S86 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
HAPLN3Q96S86 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HAPLN3Q96S86 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.48■■□□□ 1.03
HAPLN3Q96S86 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HAPLN3Q96S86 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
HAPLN3Q96S86 CNN2P6-201ENST00000439038 900 ntBASIC21.48■■□□□ 1.03
HAPLN3Q96S86 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.48■■□□□ 1.03
HAPLN3Q96S86 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.48■■□□□ 1.03
HAPLN3Q96S86 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.48■■□□□ 1.03
HAPLN3Q96S86 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HAPLN3Q96S86 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HAPLN3Q96S86 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HAPLN3Q96S86 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HAPLN3Q96S86 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
HAPLN3Q96S86 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HAPLN3Q96S86 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
HAPLN3Q96S86 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.48■■□□□ 1.03
HAPLN3Q96S86 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HAPLN3Q96S86 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HAPLN3Q96S86 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HAPLN3Q96S86 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
HAPLN3Q96S86 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.47■■□□□ 1.03
HAPLN3Q96S86 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.47■■□□□ 1.03
HAPLN3Q96S86 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.47■■□□□ 1.03
HAPLN3Q96S86 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.47■■□□□ 1.03
HAPLN3Q96S86 AC073111.5-205ENST00000641717 521 ntBASIC21.47■■□□□ 1.03
HAPLN3Q96S86 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
HAPLN3Q96S86 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
HAPLN3Q96S86 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HAPLN3Q96S86 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HAPLN3Q96S86 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HAPLN3Q96S86 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
HAPLN3Q96S86 AF106564.1-201ENST00000607058 2553 ntBASIC21.46■■□□□ 1.03
HAPLN3Q96S86 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.46■■□□□ 1.03
HAPLN3Q96S86 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HAPLN3Q96S86 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HAPLN3Q96S86 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HAPLN3Q96S86 CDCA4P2-201ENST00000441182 718 ntBASIC21.46■■□□□ 1.03
HAPLN3Q96S86 AL162412.1-201ENST00000567129 965 ntBASIC21.46■■□□□ 1.03
HAPLN3Q96S86 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HAPLN3Q96S86 AL591742.1-201ENST00000604433 565 ntBASIC21.46■■□□□ 1.03
HAPLN3Q96S86 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
HAPLN3Q96S86 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.46■■□□□ 1.03
HAPLN3Q96S86 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.46■■□□□ 1.03
HAPLN3Q96S86 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HAPLN3Q96S86 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HAPLN3Q96S86 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HAPLN3Q96S86 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.45■■□□□ 1.02
HAPLN3Q96S86 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HAPLN3Q96S86 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HAPLN3Q96S86 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.45■■□□□ 1.02
HAPLN3Q96S86 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.45■■□□□ 1.02
HAPLN3Q96S86 AC007322.1-201ENST00000426983 750 ntBASIC21.45■■□□□ 1.02
HAPLN3Q96S86 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HAPLN3Q96S86 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.45■■□□□ 1.02
HAPLN3Q96S86 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.45■■□□□ 1.02
HAPLN3Q96S86 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.45■■□□□ 1.02
HAPLN3Q96S86 RAP2CP1-201ENST00000605103 478 ntBASIC21.45■■□□□ 1.02
HAPLN3Q96S86 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
HAPLN3Q96S86 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HAPLN3Q96S86 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HAPLN3Q96S86 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HAPLN3Q96S86 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HAPLN3Q96S86 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HAPLN3Q96S86 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.44■■□□□ 1.02
HAPLN3Q96S86 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
HAPLN3Q96S86 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
HAPLN3Q96S86 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.44■■□□□ 1.02
HAPLN3Q96S86 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.44■■□□□ 1.02
HAPLN3Q96S86 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.44■■□□□ 1.02
HAPLN3Q96S86 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
HAPLN3Q96S86 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.44■■□□□ 1.02
HAPLN3Q96S86 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
HAPLN3Q96S86 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HAPLN3Q96S86 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HAPLN3Q96S86 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
HAPLN3Q96S86 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.43■■□□□ 1.02
HAPLN3Q96S86 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HAPLN3Q96S86 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HAPLN3Q96S86 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
HAPLN3Q96S86 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
HAPLN3Q96S86 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.43■■□□□ 1.02
HAPLN3Q96S86 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.43■■□□□ 1.02
HAPLN3Q96S86 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.43■■□□□ 1.02
HAPLN3Q96S86 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HAPLN3Q96S86 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HAPLN3Q96S86 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HAPLN3Q96S86 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.43■■□□□ 1.02
HAPLN3Q96S86 AC116050.2-201ENST00000612102 1779 ntBASIC21.43■■□□□ 1.02
HAPLN3Q96S86 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HAPLN3Q96S86 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.43■■□□□ 1.02
HAPLN3Q96S86 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HAPLN3Q96S86 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HAPLN3Q96S86 RNF165-205ENST00000588679 2904 ntBASIC21.42■■□□□ 1.02
HAPLN3Q96S86 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
HAPLN3Q96S86 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
HAPLN3Q96S86 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms