Protein–RNA interactions for Protein: Q70CQ3

USP30, Ubiquitin carboxyl-terminal hydrolase 30, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP30Q70CQ3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP30Q70CQ3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP30Q70CQ3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP30Q70CQ3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.79■□□□□ 0.92
USP30Q70CQ3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP30Q70CQ3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP30Q70CQ3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
USP30Q70CQ3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP30Q70CQ3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.79■□□□□ 0.92
USP30Q70CQ3 AL355472.2-201ENST00000422958 438 ntBASIC20.79■□□□□ 0.92
USP30Q70CQ3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.79■□□□□ 0.92
USP30Q70CQ3 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.79■□□□□ 0.92
USP30Q70CQ3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.79■□□□□ 0.92
USP30Q70CQ3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
USP30Q70CQ3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.79■□□□□ 0.92
USP30Q70CQ3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
USP30Q70CQ3 AL589743.5-201ENST00000616611 1050 ntBASIC20.79■□□□□ 0.92
USP30Q70CQ3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP30Q70CQ3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.79■□□□□ 0.92
USP30Q70CQ3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.79■□□□□ 0.92
USP30Q70CQ3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP30Q70CQ3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP30Q70CQ3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.78■□□□□ 0.92
USP30Q70CQ3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP30Q70CQ3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP30Q70CQ3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
USP30Q70CQ3 ESRRAP1-201ENST00000400596 1257 ntBASIC20.78■□□□□ 0.92
USP30Q70CQ3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
USP30Q70CQ3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.78■□□□□ 0.92
USP30Q70CQ3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP30Q70CQ3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
USP30Q70CQ3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP30Q70CQ3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.77■□□□□ 0.92
USP30Q70CQ3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USP30Q70CQ3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP30Q70CQ3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
USP30Q70CQ3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP30Q70CQ3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.77■□□□□ 0.92
USP30Q70CQ3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP30Q70CQ3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP30Q70CQ3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP30Q70CQ3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP30Q70CQ3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
USP30Q70CQ3 AC008687.6-201ENST00000596318 630 ntBASIC20.77■□□□□ 0.92
USP30Q70CQ3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP30Q70CQ3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
USP30Q70CQ3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP30Q70CQ3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
USP30Q70CQ3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP30Q70CQ3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.77■□□□□ 0.91
USP30Q70CQ3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.77■□□□□ 0.91
USP30Q70CQ3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
USP30Q70CQ3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP30Q70CQ3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP30Q70CQ3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP30Q70CQ3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.76■□□□□ 0.91
USP30Q70CQ3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP30Q70CQ3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.76■□□□□ 0.91
USP30Q70CQ3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.76■□□□□ 0.91
USP30Q70CQ3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.76■□□□□ 0.91
USP30Q70CQ3 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.76■□□□□ 0.91
USP30Q70CQ3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.76■□□□□ 0.91
USP30Q70CQ3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.76■□□□□ 0.91
USP30Q70CQ3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP30Q70CQ3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.76■□□□□ 0.91
USP30Q70CQ3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
USP30Q70CQ3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP30Q70CQ3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.76■□□□□ 0.91
USP30Q70CQ3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
USP30Q70CQ3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP30Q70CQ3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP30Q70CQ3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.75■□□□□ 0.91
USP30Q70CQ3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP30Q70CQ3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.75■□□□□ 0.91
USP30Q70CQ3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP30Q70CQ3 PRORSD1P-201ENST00000295112 541 ntBASIC20.75■□□□□ 0.91
USP30Q70CQ3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP30Q70CQ3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP30Q70CQ3 KRT18P68-201ENST00000392293 1000 ntBASIC20.75■□□□□ 0.91
USP30Q70CQ3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.75■□□□□ 0.91
USP30Q70CQ3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.75■□□□□ 0.91
USP30Q70CQ3 UNC93B5-201ENST00000530315 699 ntBASIC20.75■□□□□ 0.91
USP30Q70CQ3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
USP30Q70CQ3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.75■□□□□ 0.91
USP30Q70CQ3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP30Q70CQ3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP30Q70CQ3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP30Q70CQ3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP30Q70CQ3 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.75■□□□□ 0.91
USP30Q70CQ3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP30Q70CQ3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP30Q70CQ3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP30Q70CQ3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
USP30Q70CQ3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP30Q70CQ3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP30Q70CQ3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP30Q70CQ3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.74■□□□□ 0.91
USP30Q70CQ3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.74■□□□□ 0.91
USP30Q70CQ3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
USP30Q70CQ3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms