Protein–RNA interactions for Protein: Q6ZMY6

WDR88, WD repeat-containing protein 88, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR88Q6ZMY6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
WDR88Q6ZMY6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
WDR88Q6ZMY6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.88■□□□□ 0.61
WDR88Q6ZMY6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.88■□□□□ 0.61
WDR88Q6ZMY6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
WDR88Q6ZMY6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
WDR88Q6ZMY6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.88■□□□□ 0.61
WDR88Q6ZMY6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.88■□□□□ 0.61
WDR88Q6ZMY6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
WDR88Q6ZMY6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
WDR88Q6ZMY6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.88■□□□□ 0.61
WDR88Q6ZMY6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.88■□□□□ 0.61
WDR88Q6ZMY6 GABARAPL3-202ENST00000624044 1851 ntBASIC18.88■□□□□ 0.61
WDR88Q6ZMY6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
WDR88Q6ZMY6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
WDR88Q6ZMY6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
WDR88Q6ZMY6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
WDR88Q6ZMY6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
WDR88Q6ZMY6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
WDR88Q6ZMY6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
WDR88Q6ZMY6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
WDR88Q6ZMY6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
WDR88Q6ZMY6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
WDR88Q6ZMY6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
WDR88Q6ZMY6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.87■□□□□ 0.61
WDR88Q6ZMY6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
WDR88Q6ZMY6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
WDR88Q6ZMY6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
WDR88Q6ZMY6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.87■□□□□ 0.61
WDR88Q6ZMY6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
WDR88Q6ZMY6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
WDR88Q6ZMY6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
WDR88Q6ZMY6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
WDR88Q6ZMY6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
WDR88Q6ZMY6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.87■□□□□ 0.61
WDR88Q6ZMY6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.87■□□□□ 0.61
WDR88Q6ZMY6 AC138907.5-202ENST00000569484 235 ntBASIC18.87■□□□□ 0.61
WDR88Q6ZMY6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
WDR88Q6ZMY6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 ZNRF2P3-201ENST00000424200 374 ntBASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
WDR88Q6ZMY6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
WDR88Q6ZMY6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.85■□□□□ 0.61
WDR88Q6ZMY6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
WDR88Q6ZMY6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
WDR88Q6ZMY6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
WDR88Q6ZMY6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
WDR88Q6ZMY6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
WDR88Q6ZMY6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
WDR88Q6ZMY6 LINC02228-203ENST00000641970 1355 ntBASIC18.85■□□□□ 0.61
WDR88Q6ZMY6 AC011484.1-201ENST00000377652 1995 ntBASIC18.85■□□□□ 0.61
WDR88Q6ZMY6 POU5F1P4-201ENST00000413175 1085 ntBASIC18.85■□□□□ 0.61
WDR88Q6ZMY6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
WDR88Q6ZMY6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
WDR88Q6ZMY6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
WDR88Q6ZMY6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
WDR88Q6ZMY6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.85■□□□□ 0.61
WDR88Q6ZMY6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
WDR88Q6ZMY6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
WDR88Q6ZMY6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
WDR88Q6ZMY6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
WDR88Q6ZMY6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
WDR88Q6ZMY6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
WDR88Q6ZMY6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.84■□□□□ 0.61
WDR88Q6ZMY6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
WDR88Q6ZMY6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
WDR88Q6ZMY6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
WDR88Q6ZMY6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.84■□□□□ 0.61
WDR88Q6ZMY6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.84■□□□□ 0.61
WDR88Q6ZMY6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
WDR88Q6ZMY6 AC008175.2-201ENST00000612840 297 ntBASIC18.84■□□□□ 0.61
WDR88Q6ZMY6 RARRES2P11-201ENST00000635158 484 ntBASIC18.84■□□□□ 0.61
WDR88Q6ZMY6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.84■□□□□ 0.61
WDR88Q6ZMY6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
WDR88Q6ZMY6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
WDR88Q6ZMY6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms