Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 NNT1YLR285W 786 nt3.64□□□□□ -1.83
SSL2Q00578 YNL184CYNL184C 327 nt3.64□□□□□ -1.83
SSL2Q00578 YPL197CYPL197C 414 nt3.64□□□□□ -1.83
SSL2Q00578 YBR012W-AYBR012W-A 1323 nt3.64□□□□□ -1.83
SSL2Q00578 YOR142W-AYOR142W-A 1323 nt3.64□□□□□ -1.83
SSL2Q00578 YPR158W-AYPR158W-A 1323 nt3.64□□□□□ -1.83
SSL2Q00578 YMR317WYMR317W 3423 nt3.64□□□□□ -1.83
SSL2Q00578 SLK19YOR195W 2466 nt3.64□□□□□ -1.83
SSL2Q00578 BYE1YKL005C 1785 nt3.63□□□□□ -1.83
SSL2Q00578 GPI13YLL031C 3054 nt3.63□□□□□ -1.83
SSL2Q00578 RAD4YER162C 2265 nt3.63□□□□□ -1.83
SSL2Q00578 YEL075CYEL075C 369 nt3.63□□□□□ -1.83
SSL2Q00578 SPT2YER161C 1002 nt3.63□□□□□ -1.83
SSL2Q00578 YMR013C-AYMR013C-A 150 nt3.63□□□□□ -1.83
SSL2Q00578 YMR304C-AYMR304C-A 351 nt3.63□□□□□ -1.83
SSL2Q00578 RPC40YPR110C 1008 nt3.63□□□□□ -1.83
SSL2Q00578 MBA1YBR185C 837 nt3.63□□□□□ -1.83
SSL2Q00578 VIP1YLR410W 3441 nt3.63□□□□□ -1.83
SSL2Q00578 HAA1YPR008W 2085 nt3.63□□□□□ -1.83
SSL2Q00578 MSL5YLR116W 1431 nt3.62□□□□□ -1.83
SSL2Q00578 STU1YBL034C 4542 nt3.62□□□□□ -1.83
SSL2Q00578 YKL068W-AYKL068W-A 237 nt3.62□□□□□ -1.83
SSL2Q00578 RNH203YLR154C 333 nt3.62□□□□□ -1.83
SSL2Q00578 YLR416CYLR416C 399 nt3.62□□□□□ -1.83
SSL2Q00578 RIM9YMR063W 720 nt3.62□□□□□ -1.83
SSL2Q00578 RPS16AYMR143W 432 nt3.62□□□□□ -1.83
SSL2Q00578 SFM1YOR021C 642 nt3.62□□□□□ -1.83
SSL2Q00578 YOR231C-AYOR231C-A 201 nt3.62□□□□□ -1.83
SSL2Q00578 EXO70YJL085W 1872 nt3.62□□□□□ -1.83
SSL2Q00578 SHS1YDL225W 1656 nt3.62□□□□□ -1.83
SSL2Q00578 CSR2YPR030W 3366 nt3.62□□□□□ -1.83
SSL2Q00578 KAP95YLR347C 2586 nt3.61□□□□□ -1.83
SSL2Q00578 YNR063WYNR063W 1824 nt3.61□□□□□ -1.83
SSL2Q00578 SKN7YHR206W 1869 nt3.61□□□□□ -1.83
SSL2Q00578 YCR045W-AYCR045W-A 351 nt3.61□□□□□ -1.83
SSL2Q00578 AAD3YCR107W 1092 nt3.61□□□□□ -1.83
SSL2Q00578 LSM1YJL124C 519 nt3.61□□□□□ -1.83
SSL2Q00578 BSC3YLR465C 309 nt3.61□□□□□ -1.83
SSL2Q00578 CGI121YML036W 546 nt3.61□□□□□ -1.83
SSL2Q00578 ERG2YMR202W 669 nt3.61□□□□□ -1.83
SSL2Q00578 YMR294W-AYMR294W-A 360 nt3.61□□□□□ -1.83
SSL2Q00578 RRT16YNL105W 429 nt3.61□□□□□ -1.83
SSL2Q00578 ATX1YNL259C 222 nt3.61□□□□□ -1.83
SSL2Q00578 HHF1YBR009C 312 nt3.61□□□□□ -1.83
SSL2Q00578 SSF2YDR312W 1362 nt3.61□□□□□ -1.83
SSL2Q00578 FLO9YAL063C 3969 nt3.61□□□□□ -1.83
SSL2Q00578 PMT6YGR199W 2280 nt3.6□□□□□ -1.83
SSL2Q00578 RRI2YOL117W 1938 nt3.6□□□□□ -1.83
SSL2Q00578 CDC55YGL190C 1581 nt3.6□□□□□ -1.83
SSL2Q00578 UBP5YER144C 2418 nt3.6□□□□□ -1.83
SSL2Q00578 NDC80YIL144W 2076 nt3.6□□□□□ -1.83
SSL2Q00578 SRD1YCR018C 666 nt3.6□□□□□ -1.83
SSL2Q00578 YCR022CYCR022C 345 nt3.6□□□□□ -1.83
SSL2Q00578 RPS14AYCR031C 414 nt3.6□□□□□ -1.83
SSL2Q00578 IRC2YDR112W 309 nt3.6□□□□□ -1.83
SSL2Q00578 YGL015CYGL015C 393 nt3.6□□□□□ -1.83
SSL2Q00578 YLR076CYLR076C 423 nt3.6□□□□□ -1.83
SSL2Q00578 YOL134CYOL134C 390 nt3.6□□□□□ -1.83
SSL2Q00578 YPR077CYPR077C 372 nt3.6□□□□□ -1.83
SSL2Q00578 DPB3YBR278W 606 nt3.6□□□□□ -1.83
SSL2Q00578 PEX1YKL197C 3132 nt3.6□□□□□ -1.83
SSL2Q00578 SPE1YKL184W 1401 nt3.6□□□□□ -1.83
SSL2Q00578 BRE5YNR051C 1548 nt3.6□□□□□ -1.83
SSL2Q00578 MDM36YPR083W 1740 nt3.59□□□□□ -1.83
SSL2Q00578 PSP1YDR505C 2526 nt3.59□□□□□ -1.83
SSL2Q00578 snR68snR68 136 nt3.59□□□□□ -1.83
SSL2Q00578 YDR431WYDR431W 312 nt3.59□□□□□ -1.83
SSL2Q00578 GRX2YDR513W 432 nt3.59□□□□□ -1.83
SSL2Q00578 USE1YGL098W 738 nt3.59□□□□□ -1.83
SSL2Q00578 FYV4YHR059W 393 nt3.59□□□□□ -1.83
SSL2Q00578 YJL086CYJL086C 369 nt3.59□□□□□ -1.83
SSL2Q00578 YKL136WYKL136W 399 nt3.59□□□□□ -1.83
SSL2Q00578 YAL064W-BYAL064W-B 381 nt3.59□□□□□ -1.83
SSL2Q00578 RPL6BYLR448W 531 nt3.59□□□□□ -1.83
SSL2Q00578 AAR2YBL074C 1068 nt3.59□□□□□ -1.83
SSL2Q00578 INO4YOL108C 456 nt3.59□□□□□ -1.83
SSL2Q00578 MDN1YLR106C 14733 nt3.59□□□□□ -1.83
SSL2Q00578 TCB3YML072C 4638 nt3.59□□□□□ -1.83
SSL2Q00578 RPN2YIL075C 2838 nt3.59□□□□□ -1.84
SSL2Q00578 ECO1YFR027W 846 nt3.58□□□□□ -1.84
SSL2Q00578 YLR269CYLR269C 351 nt3.58□□□□□ -1.84
SSL2Q00578 YAF9YNL107W 681 nt3.58□□□□□ -1.84
SSL2Q00578 PDR17YNL264C 1053 nt3.58□□□□□ -1.84
SSL2Q00578 SRL1YOR247W 633 nt3.58□□□□□ -1.84
SSL2Q00578 IRC16YPR038W 360 nt3.58□□□□□ -1.84
SSL2Q00578 STI1YOR027W 1770 nt3.58□□□□□ -1.84
SSL2Q00578 YDR149CYDR149C 708 nt3.57□□□□□ -1.84
SSL2Q00578 SDC1YDR469W 528 nt3.57□□□□□ -1.84
SSL2Q00578 MIC19YFR011C 513 nt3.57□□□□□ -1.84
SSL2Q00578 RPL11BYGR085C 525 nt3.57□□□□□ -1.84
SSL2Q00578 YJR079WYJR079W 330 nt3.57□□□□□ -1.84
SSL2Q00578 AIM26YKL037W 357 nt3.57□□□□□ -1.84
SSL2Q00578 COQ10YOL008W 624 nt3.57□□□□□ -1.84
SSL2Q00578 PEP12YOR036W 867 nt3.57□□□□□ -1.84
SSL2Q00578 YPL038W-AYPL038W-A 192 nt3.57□□□□□ -1.84
SSL2Q00578 RPL11AYPR102C 525 nt3.57□□□□□ -1.84
SSL2Q00578 snR35snR35 204 nt3.57□□□□□ -1.84
SSL2Q00578 MET10YFR030W 3108 nt3.57□□□□□ -1.84
SSL2Q00578 YPS6YIR039C 1614 nt3.56□□□□□ -1.84
SSL2Q00578 SEN54YPL083C 1404 nt3.56□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 50.1 ms