Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm7284-201ENSMUST00000131667 944 ntBASIC16.7■□□□□ 0.26
Cacna1aP97445 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.7■□□□□ 0.26
Cacna1aP97445 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.7■□□□□ 0.26
Cacna1aP97445 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cacna1aP97445 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cacna1aP97445 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1aP97445 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.69■□□□□ 0.26
Cacna1aP97445 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1aP97445 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1aP97445 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Cacna1aP97445 Mir6349-201ENSMUST00000184059 97 ntBASIC16.69■□□□□ 0.26
Cacna1aP97445 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1aP97445 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1aP97445 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1aP97445 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cacna1aP97445 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1aP97445 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1aP97445 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.69■□□□□ 0.26
Cacna1aP97445 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cacna1aP97445 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1aP97445 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1aP97445 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1aP97445 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1aP97445 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1aP97445 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1aP97445 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cacna1aP97445 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cacna1aP97445 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Cacna1aP97445 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.68■□□□□ 0.26
Cacna1aP97445 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1aP97445 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cacna1aP97445 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1aP97445 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1aP97445 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1aP97445 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Cacna1aP97445 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1aP97445 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.67■□□□□ 0.26
Cacna1aP97445 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1aP97445 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1aP97445 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1aP97445 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1aP97445 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1aP97445 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Cacna1aP97445 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1aP97445 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1aP97445 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1aP97445 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1aP97445 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.67■□□□□ 0.26
Cacna1aP97445 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1aP97445 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1aP97445 Gm45058-201ENSMUST00000205810 766 ntBASIC16.67■□□□□ 0.26
Cacna1aP97445 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1aP97445 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1aP97445 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1aP97445 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1aP97445 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1aP97445 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1aP97445 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1aP97445 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1aP97445 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1aP97445 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1aP97445 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1aP97445 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cacna1aP97445 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1aP97445 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1aP97445 Gm18959-201ENSMUST00000208954 655 ntBASIC16.66■□□□□ 0.26
Cacna1aP97445 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1aP97445 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cacna1aP97445 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.66■□□□□ 0.26
Cacna1aP97445 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1aP97445 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.65■□□□□ 0.26
Cacna1aP97445 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1aP97445 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1aP97445 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.65■□□□□ 0.26
Cacna1aP97445 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1aP97445 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1aP97445 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1aP97445 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1aP97445 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1aP97445 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1aP97445 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1aP97445 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1aP97445 Gm38285-201ENSMUST00000192928 922 ntBASIC16.65■□□□□ 0.26
Cacna1aP97445 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cacna1aP97445 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.65■□□□□ 0.26
Cacna1aP97445 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.65■□□□□ 0.26
Cacna1aP97445 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1aP97445 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1aP97445 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Cacna1aP97445 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1aP97445 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1aP97445 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.64■□□□□ 0.25
Cacna1aP97445 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1aP97445 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1aP97445 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.64■□□□□ 0.25
Cacna1aP97445 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1aP97445 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Cacna1aP97445 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1aP97445 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1aP97445 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms