Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 SLK19YOR195W 2466 nt2.86□□□□□ -1.95
RPT4P53549 PHO91YNR013C 2685 nt2.86□□□□□ -1.95
RPT4P53549 RAD18YCR066W 1464 nt2.85□□□□□ -1.95
RPT4P53549 PNC1YGL037C 651 nt2.85□□□□□ -1.95
RPT4P53549 YGR160WYGR160W 612 nt2.85□□□□□ -1.95
RPT4P53549 YGR283CYGR283C 1026 nt2.85□□□□□ -1.95
RPT4P53549 LIN1YHR156C 1023 nt2.85□□□□□ -1.95
RPT4P53549 FRE2YKL220C 2136 nt2.85□□□□□ -1.95
RPT4P53549 YLL044WYLL044W 447 nt2.85□□□□□ -1.95
RPT4P53549 ATX1YNL259C 222 nt2.85□□□□□ -1.95
RPT4P53549 CSI2YOL007C 1026 nt2.85□□□□□ -1.95
RPT4P53549 YOR055WYOR055W 435 nt2.85□□□□□ -1.95
RPT4P53549 BIT61YJL058C 1632 nt2.85□□□□□ -1.95
RPT4P53549 YNL193WYNL193W 1677 nt2.85□□□□□ -1.95
RPT4P53549 DBF20YPR111W 1695 nt2.85□□□□□ -1.95
RPT4P53549 SOK1YDR006C 2706 nt2.84□□□□□ -1.95
RPT4P53549 DSE4YNR067C 3354 nt2.84□□□□□ -1.95
RPT4P53549 JJJ2YJL162C 1752 nt2.84□□□□□ -1.95
RPT4P53549 ANR2YKL047W 1551 nt2.84□□□□□ -1.95
RPT4P53549 ARK1YNL020C 1917 nt2.84□□□□□ -1.95
RPT4P53549 PUF6YDR496C 1971 nt2.84□□□□□ -1.95
RPT4P53549 YDR262WYDR262W 819 nt2.84□□□□□ -1.95
RPT4P53549 TCD1YHR003C 1290 nt2.84□□□□□ -1.95
RPT4P53549 URA5YML106W 681 nt2.84□□□□□ -1.95
RPT4P53549 ATP11YNL315C 957 nt2.84□□□□□ -1.95
RPT4P53549 PDR11YIL013C 4236 nt2.84□□□□□ -1.96
RPT4P53549 MSB1YOR188W 3414 nt2.84□□□□□ -1.96
RPT4P53549 BOI1YBL085W 2943 nt2.83□□□□□ -1.96
RPT4P53549 SRB4YER022W 2064 nt2.83□□□□□ -1.96
RPT4P53549 YPR1YDR368W 939 nt2.83□□□□□ -1.96
RPT4P53549 SAE2YGL175C 1038 nt2.83□□□□□ -1.96
RPT4P53549 CAP1YKL007W 807 nt2.83□□□□□ -1.96
RPT4P53549 INP1YMR204C 1263 nt2.83□□□□□ -1.96
RPT4P53549 RBL2YOR265W 321 nt2.83□□□□□ -1.96
RPT4P53549 RSN1YMR266W 2862 nt2.83□□□□□ -1.96
RPT4P53549 ATG11YPR049C 3537 nt2.82□□□□□ -1.96
RPT4P53549 SSQ1YLR369W 1974 nt2.82□□□□□ -1.96
RPT4P53549 YDR203WYDR203W 318 nt2.82□□□□□ -1.96
RPT4P53549 THG1YGR024C 714 nt2.82□□□□□ -1.96
RPT4P53549 BET3YKR068C 582 nt2.82□□□□□ -1.96
RPT4P53549 RPL16BYNL069C 597 nt2.82□□□□□ -1.96
RPT4P53549 DGK1YOR311C 873 nt2.82□□□□□ -1.96
RPT4P53549 POP7YBR167C 423 nt2.82□□□□□ -1.96
RPT4P53549 AGE1YDR524C 1449 nt2.82□□□□□ -1.96
RPT4P53549 ERT1YBR239C 1590 nt2.82□□□□□ -1.96
RPT4P53549 MOT1YPL082C 5604 nt2.82□□□□□ -1.96
RPT4P53549 RTT10YPL183C 3042 nt2.81□□□□□ -1.96
RPT4P53549 YCR013CYCR013C 648 nt2.81□□□□□ -1.96
RPT4P53549 RSM28YDR494W 1086 nt2.81□□□□□ -1.96
RPT4P53549 YFL012WYFL012W 447 nt2.81□□□□□ -1.96
RPT4P53549 YGL109WYGL109W 324 nt2.81□□□□□ -1.96
RPT4P53549 BAT1YHR208W 1182 nt2.81□□□□□ -1.96
RPT4P53549 YPT52YKR014C 705 nt2.81□□□□□ -1.96
RPT4P53549 LCL2YLR104W 396 nt2.81□□□□□ -1.96
RPT4P53549 MST28YAR033W 705 nt2.81□□□□□ -1.96
RPT4P53549 YLR230WYLR230W 306 nt2.81□□□□□ -1.96
RPT4P53549 YMR181CYMR181C 465 nt2.81□□□□□ -1.96
RPT4P53549 NGL1YOL042W 1092 nt2.81□□□□□ -1.96
RPT4P53549 BRX1YOL077C 876 nt2.81□□□□□ -1.96
RPT4P53549 YPL119C-AYPL119C-A 264 nt2.81□□□□□ -1.96
RPT4P53549 YDR098C-BYDR098C-B 5268 nt2.81□□□□□ -1.96
RPT4P53549 YDR210C-DYDR210C-D 5268 nt2.81□□□□□ -1.96
RPT4P53549 YDR316W-BYDR316W-B 5268 nt2.81□□□□□ -1.96
RPT4P53549 YDR365W-BYDR365W-B 5268 nt2.81□□□□□ -1.96
RPT4P53549 YER138CYER138C 5268 nt2.81□□□□□ -1.96
RPT4P53549 YER160CYER160C 5268 nt2.81□□□□□ -1.96
RPT4P53549 YGR038C-BYGR038C-B 5268 nt2.81□□□□□ -1.96
RPT4P53549 YGR161C-DYGR161C-D 5268 nt2.81□□□□□ -1.96
RPT4P53549 YJR027WYJR027W 5268 nt2.81□□□□□ -1.96
RPT4P53549 YLR157C-BYLR157C-B 5268 nt2.81□□□□□ -1.96
RPT4P53549 YML039WYML039W 5268 nt2.81□□□□□ -1.96
RPT4P53549 YML045WYML045W 5268 nt2.81□□□□□ -1.96
RPT4P53549 YMR050CYMR050C 5268 nt2.81□□□□□ -1.96
RPT4P53549 YOL103W-BYOL103W-B 5268 nt2.81□□□□□ -1.96
RPT4P53549 YBR012W-BYBR012W-B 5271 nt2.81□□□□□ -1.96
RPT4P53549 YOR142W-BYOR142W-B 5268 nt2.81□□□□□ -1.96
RPT4P53549 YPL257W-BYPL257W-B 5268 nt2.81□□□□□ -1.96
RPT4P53549 YPR158W-BYPR158W-B 5271 nt2.81□□□□□ -1.96
RPT4P53549 TFB1YDR311W 1929 nt2.81□□□□□ -1.96
RPT4P53549 ASI3YNL008C 2031 nt2.81□□□□□ -1.96
RPT4P53549 ESL1YIL151C 3357 nt2.81□□□□□ -1.96
RPT4P53549 PRP8YHR165C 7242 nt2.81□□□□□ -1.96
RPT4P53549 LST4YKL176C 2487 nt2.8□□□□□ -1.96
RPT4P53549 CDC20YGL116W 1833 nt2.8□□□□□ -1.96
RPT4P53549 GCD10YNL062C 1437 nt2.8□□□□□ -1.96
RPT4P53549 SNA4YDL123W 423 nt2.8□□□□□ -1.96
RPT4P53549 KEI1YDR367W 666 nt2.8□□□□□ -1.96
RPT4P53549 PGD1YGL025C 1194 nt2.8□□□□□ -1.96
RPT4P53549 PCL5YHR071W 690 nt2.8□□□□□ -1.96
RPT4P53549 YAL016C-BYAL016C-B 186 nt2.8□□□□□ -1.96
RPT4P53549 YJL133C-AYJL133C-A 225 nt2.8□□□□□ -1.96
RPT4P53549 RPL20AYMR242C 519 nt2.8□□□□□ -1.96
RPT4P53549 BUD21YOR078W 645 nt2.8□□□□□ -1.96
RPT4P53549 RSA1YPL193W 1146 nt2.8□□□□□ -1.96
RPT4P53549 AFT2YPL202C 1251 nt2.8□□□□□ -1.96
RPT4P53549 CUR1YPR158W 759 nt2.8□□□□□ -1.96
RPT4P53549 RGR1YLR071C 3249 nt2.79□□□□□ -1.96
RPT4P53549 YDR248CYDR248C 582 nt2.79□□□□□ -1.96
RPT4P53549 TAD1YGL243W 1203 nt2.79□□□□□ -1.96
RPT4P53549 RPL11BYGR085C 525 nt2.79□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 94.4 ms