Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 KRI1YNL308C 1776 nt4.89□□□□□ -1.63
TY1A-PR2P0CX60 MRP10YDL045W-A 288 nt4.89□□□□□ -1.63
TY1A-PR2P0CX60 RPC10YHR143W-A 213 nt4.89□□□□□ -1.63
TY1A-PR2P0CX60 HTB2YBL002W 396 nt4.89□□□□□ -1.63
TY1A-PR2P0CX60 PFY1YOR122C 381 nt4.89□□□□□ -1.63
TY1A-PR2P0CX60 MRPS16YPL013C 366 nt4.89□□□□□ -1.63
TY1A-PR2P0CX60 SRS2YJL092W 3525 nt4.89□□□□□ -1.63
TY1A-PR2P0CX60 ECM25YJL201W 1800 nt4.88□□□□□ -1.63
TY1A-PR2P0CX60 ERG7YHR072W 2196 nt4.88□□□□□ -1.63
TY1A-PR2P0CX60 BUD5YCR038C 1929 nt4.88□□□□□ -1.63
TY1A-PR2P0CX60 RIP1YEL024W 648 nt4.88□□□□□ -1.63
TY1A-PR2P0CX60 YER188C-AYER188C-A 300 nt4.88□□□□□ -1.63
TY1A-PR2P0CX60 SHH3YMR118C 591 nt4.88□□□□□ -1.63
TY1A-PR2P0CX60 YMR122CYMR122C 375 nt4.88□□□□□ -1.63
TY1A-PR2P0CX60 SUI1YNL244C 327 nt4.88□□□□□ -1.63
TY1A-PR2P0CX60 snR10snR10 245 nt4.88□□□□□ -1.63
TY1A-PR2P0CX60 ATG12YBR217W 561 nt4.88□□□□□ -1.63
TY1A-PR2P0CX60 IRC3YDR332W 2070 nt4.88□□□□□ -1.63
TY1A-PR2P0CX60 ARG2YJL071W 1725 nt4.88□□□□□ -1.63
TY1A-PR2P0CX60 YKL222CYKL222C 2118 nt4.88□□□□□ -1.63
TY1A-PR2P0CX60 VPS41YDR080W 2979 nt4.88□□□□□ -1.63
TY1A-PR2P0CX60 CYK3YDL117W 2658 nt4.88□□□□□ -1.63
TY1A-PR2P0CX60 VAC14YLR386W 2643 nt4.87□□□□□ -1.63
TY1A-PR2P0CX60 OPT2YPR194C 2634 nt4.87□□□□□ -1.63
TY1A-PR2P0CX60 PWP1YLR196W 1731 nt4.87□□□□□ -1.63
TY1A-PR2P0CX60 CDC26YFR036W 375 nt4.87□□□□□ -1.63
TY1A-PR2P0CX60 YJR140W-AYJR140W-A 150 nt4.87□□□□□ -1.63
TY1A-PR2P0CX60 YMR172C-AYMR172C-A 384 nt4.87□□□□□ -1.63
TY1A-PR2P0CX60 HOR7YMR251W-A 180 nt4.87□□□□□ -1.63
TY1A-PR2P0CX60 YOL085W-AYOL085W-A 213 nt4.87□□□□□ -1.63
TY1A-PR2P0CX60 MCP1YOR228C 909 nt4.87□□□□□ -1.63
TY1A-PR2P0CX60 YML082WYML082W 1950 nt4.87□□□□□ -1.63
TY1A-PR2P0CX60 EMP70YLR083C 2004 nt4.87□□□□□ -1.63
TY1A-PR2P0CX60 SMI1YGR229C 1518 nt4.87□□□□□ -1.63
TY1A-PR2P0CX60 REV1YOR346W 2958 nt4.86□□□□□ -1.63
TY1A-PR2P0CX60 TPS3YMR261C 3165 nt4.86□□□□□ -1.63
TY1A-PR2P0CX60 MSH4YFL003C 2637 nt4.86□□□□□ -1.63
TY1A-PR2P0CX60 DAD4YDR320C-A 219 nt4.86□□□□□ -1.63
TY1A-PR2P0CX60 YEL018C-AYEL018C-A 534 nt4.86□□□□□ -1.63
TY1A-PR2P0CX60 YEL068CYEL068C 333 nt4.86□□□□□ -1.63
TY1A-PR2P0CX60 BCD1YHR040W 1101 nt4.86□□□□□ -1.63
TY1A-PR2P0CX60 RPB11YOL005C 363 nt4.86□□□□□ -1.63
TY1A-PR2P0CX60 SWD3YBR175W 948 nt4.86□□□□□ -1.63
TY1A-PR2P0CX60 YDR544CYDR544C 429 nt4.85□□□□□ -1.63
TY1A-PR2P0CX60 YOR072W-AYOR072W-A 249 nt4.85□□□□□ -1.63
TY1A-PR2P0CX60 ACC1YNR016C 6702 nt4.85□□□□□ -1.63
TY1A-PR2P0CX60 TRS85YDR108W 2097 nt4.84□□□□□ -1.63
TY1A-PR2P0CX60 RPS26BYER131W 360 nt4.84□□□□□ -1.63
TY1A-PR2P0CX60 RPL29YFR032C-A 180 nt4.84□□□□□ -1.63
TY1A-PR2P0CX60 YLR053CYLR053C 327 nt4.84□□□□□ -1.63
TY1A-PR2P0CX60 YPR076WYPR076W 375 nt4.84□□□□□ -1.63
TY1A-PR2P0CX60 YDR109CYDR109C 2148 nt4.84□□□□□ -1.64
TY1A-PR2P0CX60 KRS1YDR037W 1776 nt4.83□□□□□ -1.64
TY1A-PR2P0CX60 SYG1YIL047C 2709 nt4.83□□□□□ -1.64
TY1A-PR2P0CX60 NAN1YPL126W 2691 nt4.83□□□□□ -1.64
TY1A-PR2P0CX60 ARF1YDL192W 546 nt4.83□□□□□ -1.64
TY1A-PR2P0CX60 CYB5YNL111C 363 nt4.83□□□□□ -1.64
TY1A-PR2P0CX60 RPL36BYPL249C-A 303 nt4.83□□□□□ -1.64
TY1A-PR2P0CX60 LRE1YCL051W 1752 nt4.83□□□□□ -1.64
TY1A-PR2P0CX60 MCX1YBR227C 1563 nt4.82□□□□□ -1.64
TY1A-PR2P0CX60 MRK1YDL079C 1506 nt4.82□□□□□ -1.64
TY1A-PR2P0CX60 COX18YGR062C 951 nt4.82□□□□□ -1.64
TY1A-PR2P0CX60 LSM2YBL026W 288 nt4.82□□□□□ -1.64
TY1A-PR2P0CX60 EGD1YPL037C 474 nt4.82□□□□□ -1.64
TY1A-PR2P0CX60 YBR259WYBR259W 2067 nt4.82□□□□□ -1.64
TY1A-PR2P0CX60 HUL4YJR036C 2679 nt4.81□□□□□ -1.64
TY1A-PR2P0CX60 PBS2YJL128C 2007 nt4.81□□□□□ -1.64
TY1A-PR2P0CX60 YDL011CYDL011C 324 nt4.81□□□□□ -1.64
TY1A-PR2P0CX60 SDH4YDR178W 546 nt4.81□□□□□ -1.64
TY1A-PR2P0CX60 RPL14BYHL001W 417 nt4.81□□□□□ -1.64
TY1A-PR2P0CX60 ATG33YLR356W 594 nt4.81□□□□□ -1.64
TY1A-PR2P0CX60 snR32snR32 188 nt4.81□□□□□ -1.64
TY1A-PR2P0CX60 BEM4YPL161C 1902 nt4.81□□□□□ -1.64
TY1A-PR2P0CX60 RAD53YPL153C 2466 nt4.81□□□□□ -1.64
TY1A-PR2P0CX60 TDA1YMR291W 1761 nt4.81□□□□□ -1.64
TY1A-PR2P0CX60 PUT2YHR037W 1728 nt4.8□□□□□ -1.64
TY1A-PR2P0CX60 DAL81YIR023W 2913 nt4.8□□□□□ -1.64
TY1A-PR2P0CX60 SYF1YDR416W 2580 nt4.8□□□□□ -1.64
TY1A-PR2P0CX60 PRO3YER023W 861 nt4.8□□□□□ -1.64
TY1A-PR2P0CX60 YKR033CYKR033C 426 nt4.8□□□□□ -1.64
TY1A-PR2P0CX60 YPL025CYPL025C 558 nt4.8□□□□□ -1.64
TY1A-PR2P0CX60 LTP1YPR073C 486 nt4.8□□□□□ -1.64
TY1A-PR2P0CX60 SIN4YNL236W 2925 nt4.79□□□□□ -1.64
TY1A-PR2P0CX60 MDM32YOR147W 1869 nt4.79□□□□□ -1.64
TY1A-PR2P0CX60 UTP4YDR324C 2331 nt4.79□□□□□ -1.64
TY1A-PR2P0CX60 DNM1YLL001W 2274 nt4.79□□□□□ -1.64
TY1A-PR2P0CX60 CUL3YGR003W 2235 nt4.79□□□□□ -1.64
TY1A-PR2P0CX60 MET12YPL023C 1974 nt4.79□□□□□ -1.64
TY1A-PR2P0CX60 YGR176WYGR176W 348 nt4.79□□□□□ -1.64
TY1A-PR2P0CX60 PEX11YOL147C 711 nt4.79□□□□□ -1.64
TY1A-PR2P0CX60 TRM7YBR061C 933 nt4.79□□□□□ -1.64
TY1A-PR2P0CX60 YRF1-4YLR466W 4149 nt4.79□□□□□ -1.64
TY1A-PR2P0CX60 MBP1YDL056W 2502 nt4.78□□□□□ -1.64
TY1A-PR2P0CX60 OAF1YAL051W 3144 nt4.78□□□□□ -1.64
TY1A-PR2P0CX60 YEL053W-AYEL053W-A 348 nt4.78□□□□□ -1.64
TY1A-PR2P0CX60 YNL057WYNL057W 333 nt4.78□□□□□ -1.64
TY1A-PR2P0CX60 APL6YGR261C 2430 nt4.78□□□□□ -1.64
TY1A-PR2P0CX60 YCR023CYCR023C 1836 nt4.78□□□□□ -1.64
TY1A-PR2P0CX60 AIP1YMR092C 1848 nt4.78□□□□□ -1.64
TY1A-PR2P0CX60 NHX1YDR456W 1902 nt4.78□□□□□ -1.64
Retrieved 100 of 7,029 protein–RNA pairs in 39.9 ms