Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc4a4O88343 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.39■■□□□ 1.01
Slc4a4O88343 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.39■■□□□ 1.01
Slc4a4O88343 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.39■■□□□ 1.01
Slc4a4O88343 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Slc4a4O88343 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.39■■□□□ 1.01
Slc4a4O88343 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.39■■□□□ 1.01
Slc4a4O88343 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Slc4a4O88343 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc4a4O88343 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Slc4a4O88343 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc4a4O88343 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc4a4O88343 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc4a4O88343 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Slc4a4O88343 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.38■■□□□ 1.01
Slc4a4O88343 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.38■■□□□ 1.01
Slc4a4O88343 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc4a4O88343 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.38■■□□□ 1.01
Slc4a4O88343 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Slc4a4O88343 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc4a4O88343 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc4a4O88343 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc4a4O88343 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc4a4O88343 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
Slc4a4O88343 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Slc4a4O88343 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc4a4O88343 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc4a4O88343 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
Slc4a4O88343 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc4a4O88343 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Slc4a4O88343 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc4a4O88343 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.37■■□□□ 1.01
Slc4a4O88343 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.37■■□□□ 1.01
Slc4a4O88343 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc4a4O88343 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc4a4O88343 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Slc4a4O88343 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc4a4O88343 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Slc4a4O88343 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
Slc4a4O88343 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc4a4O88343 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Slc4a4O88343 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Slc4a4O88343 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Slc4a4O88343 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.36■■□□□ 1.01
Slc4a4O88343 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc4a4O88343 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc4a4O88343 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Slc4a4O88343 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc4a4O88343 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Slc4a4O88343 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
Slc4a4O88343 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Slc4a4O88343 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Slc4a4O88343 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.35■■□□□ 1.01
Slc4a4O88343 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Slc4a4O88343 Gm10138-203ENSMUST00000206952 366 ntBASIC21.35■■□□□ 1.01
Slc4a4O88343 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc4a4O88343 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc4a4O88343 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc4a4O88343 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc4a4O88343 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.35■■□□□ 1.01
Slc4a4O88343 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc4a4O88343 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc4a4O88343 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Slc4a4O88343 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Slc4a4O88343 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc4a4O88343 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc4a4O88343 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc4a4O88343 Gm15378-201ENSMUST00000121894 207 ntBASIC21.34■■□□□ 1.01
Slc4a4O88343 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Slc4a4O88343 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Slc4a4O88343 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc4a4O88343 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Slc4a4O88343 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc4a4O88343 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc4a4O88343 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc4a4O88343 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc4a4O88343 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Slc4a4O88343 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc4a4O88343 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc4a4O88343 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.33■■□□□ 1.01
Slc4a4O88343 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Slc4a4O88343 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc4a4O88343 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc4a4O88343 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.33■■□□□ 1
Slc4a4O88343 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc4a4O88343 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc4a4O88343 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc4a4O88343 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Slc4a4O88343 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.32■■□□□ 1
Slc4a4O88343 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc4a4O88343 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.32■■□□□ 1
Slc4a4O88343 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc4a4O88343 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc4a4O88343 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Slc4a4O88343 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.32■■□□□ 1
Slc4a4O88343 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc4a4O88343 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.32■■□□□ 1
Slc4a4O88343 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.32■■□□□ 1
Slc4a4O88343 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.32■■□□□ 1
Slc4a4O88343 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms