Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rsph3bQ9DA80 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rsph3bQ9DA80 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.91■□□□□ 0.78
Rsph3bQ9DA80 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.9■□□□□ 0.78
Rsph3bQ9DA80 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rsph3bQ9DA80 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Rsph3bQ9DA80 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Rsph3bQ9DA80 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rsph3bQ9DA80 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rsph3bQ9DA80 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.9■□□□□ 0.78
Rsph3bQ9DA80 Mtag2-201ENSMUST00000058665 714 ntBASIC19.9■□□□□ 0.78
Rsph3bQ9DA80 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rsph3bQ9DA80 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.9■□□□□ 0.78
Rsph3bQ9DA80 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rsph3bQ9DA80 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Rsph3bQ9DA80 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rsph3bQ9DA80 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rsph3bQ9DA80 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
Rsph3bQ9DA80 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rsph3bQ9DA80 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rsph3bQ9DA80 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rsph3bQ9DA80 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Rsph3bQ9DA80 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rsph3bQ9DA80 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rsph3bQ9DA80 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.89■□□□□ 0.77
Rsph3bQ9DA80 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rsph3bQ9DA80 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rsph3bQ9DA80 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rsph3bQ9DA80 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rsph3bQ9DA80 Zfp783-201ENSMUST00000095946 670 ntBASIC19.89■□□□□ 0.77
Rsph3bQ9DA80 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Rsph3bQ9DA80 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rsph3bQ9DA80 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Rsph3bQ9DA80 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rsph3bQ9DA80 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.88■□□□□ 0.77
Rsph3bQ9DA80 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rsph3bQ9DA80 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rsph3bQ9DA80 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Rsph3bQ9DA80 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Rsph3bQ9DA80 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rsph3bQ9DA80 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.88■□□□□ 0.77
Rsph3bQ9DA80 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rsph3bQ9DA80 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rsph3bQ9DA80 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rsph3bQ9DA80 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rsph3bQ9DA80 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rsph3bQ9DA80 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rsph3bQ9DA80 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rsph3bQ9DA80 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Rsph3bQ9DA80 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rsph3bQ9DA80 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.87■□□□□ 0.77
Rsph3bQ9DA80 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rsph3bQ9DA80 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rsph3bQ9DA80 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rsph3bQ9DA80 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Rsph3bQ9DA80 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rsph3bQ9DA80 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rsph3bQ9DA80 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rsph3bQ9DA80 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rsph3bQ9DA80 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rsph3bQ9DA80 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.86■□□□□ 0.77
Rsph3bQ9DA80 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rsph3bQ9DA80 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rsph3bQ9DA80 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.86■□□□□ 0.77
Rsph3bQ9DA80 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rsph3bQ9DA80 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rsph3bQ9DA80 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rsph3bQ9DA80 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rsph3bQ9DA80 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rsph3bQ9DA80 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rsph3bQ9DA80 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Rsph3bQ9DA80 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rsph3bQ9DA80 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rsph3bQ9DA80 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.85■□□□□ 0.77
Rsph3bQ9DA80 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rsph3bQ9DA80 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.85■□□□□ 0.77
Rsph3bQ9DA80 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rsph3bQ9DA80 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rsph3bQ9DA80 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rsph3bQ9DA80 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Rsph3bQ9DA80 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rsph3bQ9DA80 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rsph3bQ9DA80 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rsph3bQ9DA80 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rsph3bQ9DA80 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Rsph3bQ9DA80 Gm715-201ENSMUST00000117865 831 ntBASIC19.84■□□□□ 0.77
Rsph3bQ9DA80 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.84■□□□□ 0.77
Rsph3bQ9DA80 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.84■□□□□ 0.77
Rsph3bQ9DA80 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rsph3bQ9DA80 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.84■□□□□ 0.77
Rsph3bQ9DA80 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.84■□□□□ 0.77
Rsph3bQ9DA80 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rsph3bQ9DA80 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rsph3bQ9DA80 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rsph3bQ9DA80 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rsph3bQ9DA80 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rsph3bQ9DA80 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Rsph3bQ9DA80 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rsph3bQ9DA80 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rsph3bQ9DA80 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms