Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb2Q91Y00 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb2Q91Y00 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb2Q91Y00 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb2Q91Y00 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb2Q91Y00 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb2Q91Y00 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb2Q91Y00 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pcdhb2Q91Y00 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.34■□□□□ 0.69
Pcdhb2Q91Y00 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb2Q91Y00 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb2Q91Y00 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb2Q91Y00 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Pcdhb2Q91Y00 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb2Q91Y00 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb2Q91Y00 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Pcdhb2Q91Y00 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb2Q91Y00 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb2Q91Y00 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb2Q91Y00 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb2Q91Y00 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb2Q91Y00 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb2Q91Y00 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb2Q91Y00 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pcdhb2Q91Y00 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb2Q91Y00 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Pcdhb2Q91Y00 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb2Q91Y00 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb2Q91Y00 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb2Q91Y00 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb2Q91Y00 Gm12896-201ENSMUST00000118430 226 ntBASIC19.33■□□□□ 0.68
Pcdhb2Q91Y00 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.33■□□□□ 0.68
Pcdhb2Q91Y00 Gm27011-201ENSMUST00000182352 972 ntBASIC19.33■□□□□ 0.68
Pcdhb2Q91Y00 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Pcdhb2Q91Y00 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb2Q91Y00 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Pcdhb2Q91Y00 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb2Q91Y00 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Pcdhb2Q91Y00 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb2Q91Y00 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Pcdhb2Q91Y00 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb2Q91Y00 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb2Q91Y00 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.32■□□□□ 0.68
Pcdhb2Q91Y00 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.32■□□□□ 0.68
Pcdhb2Q91Y00 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhb2Q91Y00 Gm2399-201ENSMUST00000104944 225 ntBASIC19.32■□□□□ 0.68
Pcdhb2Q91Y00 Gm12527-201ENSMUST00000117967 564 ntBASIC19.32■□□□□ 0.68
Pcdhb2Q91Y00 Gm20760-201ENSMUST00000179197 648 ntBASIC19.32■□□□□ 0.68
Pcdhb2Q91Y00 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb2Q91Y00 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.32■□□□□ 0.68
Pcdhb2Q91Y00 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb2Q91Y00 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdhb2Q91Y00 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb2Q91Y00 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb2Q91Y00 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb2Q91Y00 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhb2Q91Y00 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb2Q91Y00 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhb2Q91Y00 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb2Q91Y00 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pcdhb2Q91Y00 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhb2Q91Y00 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb2Q91Y00 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb2Q91Y00 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb2Q91Y00 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb2Q91Y00 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb2Q91Y00 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.3■□□□□ 0.68
Pcdhb2Q91Y00 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb2Q91Y00 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb2Q91Y00 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Pcdhb2Q91Y00 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.3■□□□□ 0.68
Pcdhb2Q91Y00 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb2Q91Y00 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pcdhb2Q91Y00 Gm10653-202ENSMUST00000139570 835 ntBASIC19.3■□□□□ 0.68
Pcdhb2Q91Y00 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb2Q91Y00 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Pcdhb2Q91Y00 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb2Q91Y00 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb2Q91Y00 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.3■□□□□ 0.68
Pcdhb2Q91Y00 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb2Q91Y00 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb2Q91Y00 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb2Q91Y00 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb2Q91Y00 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.29■□□□□ 0.68
Pcdhb2Q91Y00 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.29■□□□□ 0.68
Pcdhb2Q91Y00 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdhb2Q91Y00 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb2Q91Y00 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdhb2Q91Y00 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb2Q91Y00 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Pcdhb2Q91Y00 Trmt13-210ENSMUST00000198454 880 ntBASIC19.29■□□□□ 0.68
Pcdhb2Q91Y00 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb2Q91Y00 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.29■□□□□ 0.68
Pcdhb2Q91Y00 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb2Q91Y00 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb2Q91Y00 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.29■□□□□ 0.68
Pcdhb2Q91Y00 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhb2Q91Y00 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb2Q91Y00 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb2Q91Y00 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms