Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smg8Q8VE18 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smg8Q8VE18 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smg8Q8VE18 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Smg8Q8VE18 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Smg8Q8VE18 Gm43183-201ENSMUST00000200632 547 ntBASIC19.43■□□□□ 0.7
Smg8Q8VE18 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Smg8Q8VE18 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.43■□□□□ 0.7
Smg8Q8VE18 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.43■□□□□ 0.7
Smg8Q8VE18 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smg8Q8VE18 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smg8Q8VE18 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smg8Q8VE18 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.42■□□□□ 0.7
Smg8Q8VE18 Gm18025-201ENSMUST00000221733 862 ntBASIC19.42■□□□□ 0.7
Smg8Q8VE18 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.42■□□□□ 0.7
Smg8Q8VE18 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smg8Q8VE18 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smg8Q8VE18 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smg8Q8VE18 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smg8Q8VE18 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smg8Q8VE18 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smg8Q8VE18 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smg8Q8VE18 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Smg8Q8VE18 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smg8Q8VE18 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smg8Q8VE18 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smg8Q8VE18 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smg8Q8VE18 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Smg8Q8VE18 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smg8Q8VE18 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smg8Q8VE18 Gm42545-201ENSMUST00000202755 922 ntBASIC19.41■□□□□ 0.7
Smg8Q8VE18 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smg8Q8VE18 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Smg8Q8VE18 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smg8Q8VE18 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smg8Q8VE18 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.41■□□□□ 0.7
Smg8Q8VE18 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smg8Q8VE18 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smg8Q8VE18 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smg8Q8VE18 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smg8Q8VE18 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smg8Q8VE18 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smg8Q8VE18 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Smg8Q8VE18 Gm37055-201ENSMUST00000191866 133 ntBASIC19.4■□□□□ 0.7
Smg8Q8VE18 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smg8Q8VE18 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.4■□□□□ 0.7
Smg8Q8VE18 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smg8Q8VE18 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smg8Q8VE18 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smg8Q8VE18 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smg8Q8VE18 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.39■□□□□ 0.69
Smg8Q8VE18 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smg8Q8VE18 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.39■□□□□ 0.69
Smg8Q8VE18 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smg8Q8VE18 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.39■□□□□ 0.69
Smg8Q8VE18 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smg8Q8VE18 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smg8Q8VE18 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smg8Q8VE18 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smg8Q8VE18 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smg8Q8VE18 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smg8Q8VE18 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.39■□□□□ 0.69
Smg8Q8VE18 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smg8Q8VE18 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smg8Q8VE18 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smg8Q8VE18 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Smg8Q8VE18 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smg8Q8VE18 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smg8Q8VE18 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smg8Q8VE18 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.38■□□□□ 0.69
Smg8Q8VE18 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smg8Q8VE18 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smg8Q8VE18 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smg8Q8VE18 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smg8Q8VE18 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smg8Q8VE18 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smg8Q8VE18 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smg8Q8VE18 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smg8Q8VE18 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smg8Q8VE18 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smg8Q8VE18 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.37■□□□□ 0.69
Smg8Q8VE18 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smg8Q8VE18 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smg8Q8VE18 Mir5122-201ENSMUST00000175004 89 ntBASIC19.37■□□□□ 0.69
Smg8Q8VE18 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.37■□□□□ 0.69
Smg8Q8VE18 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.37■□□□□ 0.69
Smg8Q8VE18 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smg8Q8VE18 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smg8Q8VE18 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smg8Q8VE18 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smg8Q8VE18 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smg8Q8VE18 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smg8Q8VE18 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Smg8Q8VE18 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Smg8Q8VE18 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.36■□□□□ 0.69
Smg8Q8VE18 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Smg8Q8VE18 Gm15565-201ENSMUST00000118890 427 ntBASIC19.36■□□□□ 0.69
Smg8Q8VE18 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.36■□□□□ 0.69
Smg8Q8VE18 Gm37292-201ENSMUST00000192062 758 ntBASIC19.36■□□□□ 0.69
Smg8Q8VE18 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms