Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Znf235Q61116 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.12■□□□□ 0.65
Znf235Q61116 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Znf235Q61116 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Znf235Q61116 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Znf235Q61116 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Znf235Q61116 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Znf235Q61116 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Znf235Q61116 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Znf235Q61116 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Znf235Q61116 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Znf235Q61116 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Znf235Q61116 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Znf235Q61116 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.11■□□□□ 0.65
Znf235Q61116 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Znf235Q61116 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Znf235Q61116 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Znf235Q61116 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Znf235Q61116 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Znf235Q61116 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Znf235Q61116 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Znf235Q61116 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Znf235Q61116 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Znf235Q61116 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Znf235Q61116 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Znf235Q61116 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Znf235Q61116 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Znf235Q61116 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Znf235Q61116 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Znf235Q61116 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Znf235Q61116 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Znf235Q61116 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Znf235Q61116 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Znf235Q61116 Tgds-204ENSMUST00000228543 1594 ntBASIC19.1■□□□□ 0.65
Znf235Q61116 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Znf235Q61116 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Znf235Q61116 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Znf235Q61116 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Znf235Q61116 Gm37055-201ENSMUST00000191866 133 ntBASIC19.09■□□□□ 0.65
Znf235Q61116 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Znf235Q61116 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Znf235Q61116 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Znf235Q61116 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Znf235Q61116 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Znf235Q61116 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Znf235Q61116 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Znf235Q61116 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Znf235Q61116 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.08■□□□□ 0.64
Znf235Q61116 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Znf235Q61116 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.08■□□□□ 0.64
Znf235Q61116 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.08■□□□□ 0.64
Znf235Q61116 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Znf235Q61116 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Znf235Q61116 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Znf235Q61116 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Znf235Q61116 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Znf235Q61116 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Znf235Q61116 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Znf235Q61116 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Znf235Q61116 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.07■□□□□ 0.64
Znf235Q61116 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.07■□□□□ 0.64
Znf235Q61116 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.07■□□□□ 0.64
Znf235Q61116 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Znf235Q61116 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Znf235Q61116 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.07■□□□□ 0.64
Znf235Q61116 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.07■□□□□ 0.64
Znf235Q61116 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.07■□□□□ 0.64
Znf235Q61116 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Znf235Q61116 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.06■□□□□ 0.64
Znf235Q61116 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Znf235Q61116 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Znf235Q61116 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Znf235Q61116 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.06■□□□□ 0.64
Znf235Q61116 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Znf235Q61116 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Znf235Q61116 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Znf235Q61116 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Znf235Q61116 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Znf235Q61116 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.06■□□□□ 0.64
Znf235Q61116 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Znf235Q61116 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Znf235Q61116 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Znf235Q61116 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Znf235Q61116 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Znf235Q61116 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Znf235Q61116 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Znf235Q61116 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Znf235Q61116 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Znf235Q61116 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Znf235Q61116 Gm21814-202ENSMUST00000203277 873 ntBASIC19.05■□□□□ 0.64
Znf235Q61116 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Znf235Q61116 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.05■□□□□ 0.64
Znf235Q61116 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Znf235Q61116 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Znf235Q61116 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Znf235Q61116 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Znf235Q61116 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Znf235Q61116 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Znf235Q61116 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.04■□□□□ 0.64
Znf235Q61116 Gm15565-201ENSMUST00000118890 427 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms