Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.35■□□□□ 0.69
Shroom1Q5SX79 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shroom1Q5SX79 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shroom1Q5SX79 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shroom1Q5SX79 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Shroom1Q5SX79 Flg-201ENSMUST00000050758 1488 ntBASIC19.35■□□□□ 0.69
Shroom1Q5SX79 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shroom1Q5SX79 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shroom1Q5SX79 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Shroom1Q5SX79 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Shroom1Q5SX79 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shroom1Q5SX79 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shroom1Q5SX79 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shroom1Q5SX79 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.34■□□□□ 0.69
Shroom1Q5SX79 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.34■□□□□ 0.69
Shroom1Q5SX79 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Shroom1Q5SX79 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shroom1Q5SX79 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Shroom1Q5SX79 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shroom1Q5SX79 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Shroom1Q5SX79 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.33■□□□□ 0.69
Shroom1Q5SX79 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Shroom1Q5SX79 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Shroom1Q5SX79 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Shroom1Q5SX79 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Shroom1Q5SX79 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Shroom1Q5SX79 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Shroom1Q5SX79 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.33■□□□□ 0.68
Shroom1Q5SX79 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.33■□□□□ 0.68
Shroom1Q5SX79 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shroom1Q5SX79 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shroom1Q5SX79 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shroom1Q5SX79 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shroom1Q5SX79 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Shroom1Q5SX79 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Shroom1Q5SX79 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shroom1Q5SX79 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Shroom1Q5SX79 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shroom1Q5SX79 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shroom1Q5SX79 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shroom1Q5SX79 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shroom1Q5SX79 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Shroom1Q5SX79 Gm715-201ENSMUST00000117865 831 ntBASIC19.32■□□□□ 0.68
Shroom1Q5SX79 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.32■□□□□ 0.68
Shroom1Q5SX79 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.32■□□□□ 0.68
Shroom1Q5SX79 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Shroom1Q5SX79 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shroom1Q5SX79 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shroom1Q5SX79 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shroom1Q5SX79 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Shroom1Q5SX79 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shroom1Q5SX79 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shroom1Q5SX79 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.31■□□□□ 0.68
Shroom1Q5SX79 Mir1199-201ENSMUST00000117015 119 ntBASIC19.31■□□□□ 0.68
Shroom1Q5SX79 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shroom1Q5SX79 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shroom1Q5SX79 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.31■□□□□ 0.68
Shroom1Q5SX79 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Shroom1Q5SX79 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shroom1Q5SX79 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shroom1Q5SX79 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shroom1Q5SX79 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shroom1Q5SX79 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Shroom1Q5SX79 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shroom1Q5SX79 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shroom1Q5SX79 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shroom1Q5SX79 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Shroom1Q5SX79 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.3■□□□□ 0.68
Shroom1Q5SX79 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shroom1Q5SX79 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shroom1Q5SX79 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shroom1Q5SX79 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shroom1Q5SX79 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shroom1Q5SX79 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shroom1Q5SX79 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shroom1Q5SX79 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Shroom1Q5SX79 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shroom1Q5SX79 Gm11927-201ENSMUST00000118472 759 ntBASIC19.29■□□□□ 0.68
Shroom1Q5SX79 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.29■□□□□ 0.68
Shroom1Q5SX79 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shroom1Q5SX79 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Shroom1Q5SX79 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shroom1Q5SX79 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shroom1Q5SX79 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shroom1Q5SX79 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Shroom1Q5SX79 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shroom1Q5SX79 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Shroom1Q5SX79 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.29■□□□□ 0.68
Shroom1Q5SX79 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom1Q5SX79 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom1Q5SX79 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom1Q5SX79 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom1Q5SX79 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom1Q5SX79 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom1Q5SX79 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom1Q5SX79 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Shroom1Q5SX79 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom1Q5SX79 Gm22325-201ENSMUST00000158904 308 ntBASIC19.28■□□□□ 0.68
Shroom1Q5SX79 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom1Q5SX79 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms