Protein–RNA interactions for Protein: Q53TQ3

INO80D, INO80 complex subunit D, humanhuman

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
INO80DQ53TQ3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
INO80DQ53TQ3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
INO80DQ53TQ3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
INO80DQ53TQ3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.13■□□□□ 0.97
INO80DQ53TQ3 CROCCP5-201ENST00000436658 830 ntBASIC21.13■□□□□ 0.97
INO80DQ53TQ3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.13■□□□□ 0.97
INO80DQ53TQ3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.13■□□□□ 0.97
INO80DQ53TQ3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
INO80DQ53TQ3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
INO80DQ53TQ3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
INO80DQ53TQ3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
INO80DQ53TQ3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
INO80DQ53TQ3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.12■□□□□ 0.97
INO80DQ53TQ3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
INO80DQ53TQ3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
INO80DQ53TQ3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
INO80DQ53TQ3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
INO80DQ53TQ3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
INO80DQ53TQ3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
INO80DQ53TQ3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.12■□□□□ 0.97
INO80DQ53TQ3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
INO80DQ53TQ3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
INO80DQ53TQ3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
INO80DQ53TQ3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.12■□□□□ 0.97
INO80DQ53TQ3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
INO80DQ53TQ3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
INO80DQ53TQ3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.12■□□□□ 0.97
INO80DQ53TQ3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
INO80DQ53TQ3 AC005181.1-201ENST00000604782 1256 ntBASIC21.12■□□□□ 0.97
INO80DQ53TQ3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
INO80DQ53TQ3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.12■□□□□ 0.97
INO80DQ53TQ3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
INO80DQ53TQ3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
INO80DQ53TQ3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.11■□□□□ 0.97
INO80DQ53TQ3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
INO80DQ53TQ3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
INO80DQ53TQ3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
INO80DQ53TQ3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.11■□□□□ 0.97
INO80DQ53TQ3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
INO80DQ53TQ3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
INO80DQ53TQ3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
INO80DQ53TQ3 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.11■□□□□ 0.97
INO80DQ53TQ3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.11■□□□□ 0.97
INO80DQ53TQ3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.11■□□□□ 0.97
INO80DQ53TQ3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
INO80DQ53TQ3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
INO80DQ53TQ3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
INO80DQ53TQ3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.11■□□□□ 0.97
INO80DQ53TQ3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.11■□□□□ 0.97
INO80DQ53TQ3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
INO80DQ53TQ3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.1■□□□□ 0.97
INO80DQ53TQ3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.1■□□□□ 0.97
INO80DQ53TQ3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
INO80DQ53TQ3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
INO80DQ53TQ3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
INO80DQ53TQ3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.1■□□□□ 0.97
INO80DQ53TQ3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
INO80DQ53TQ3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.1■□□□□ 0.97
INO80DQ53TQ3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.1■□□□□ 0.97
INO80DQ53TQ3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
INO80DQ53TQ3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
INO80DQ53TQ3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
INO80DQ53TQ3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
INO80DQ53TQ3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
INO80DQ53TQ3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
INO80DQ53TQ3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
INO80DQ53TQ3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.09■□□□□ 0.97
INO80DQ53TQ3 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.09■□□□□ 0.97
INO80DQ53TQ3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
INO80DQ53TQ3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
INO80DQ53TQ3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
INO80DQ53TQ3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
INO80DQ53TQ3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
INO80DQ53TQ3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
INO80DQ53TQ3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
INO80DQ53TQ3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
INO80DQ53TQ3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.09■□□□□ 0.97
INO80DQ53TQ3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.08■□□□□ 0.97
INO80DQ53TQ3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.08■□□□□ 0.97
INO80DQ53TQ3 AL024507.2-201ENST00000606070 2574 ntBASIC21.08■□□□□ 0.97
INO80DQ53TQ3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
INO80DQ53TQ3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
INO80DQ53TQ3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
INO80DQ53TQ3 MIR663A-201ENST00000385250 93 ntBASIC21.08■□□□□ 0.97
INO80DQ53TQ3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.08■□□□□ 0.97
INO80DQ53TQ3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
INO80DQ53TQ3 AC006970.2-201ENST00000450065 779 ntBASIC21.08■□□□□ 0.97
INO80DQ53TQ3 CDV3P1-201ENST00000471403 739 ntBASIC21.08■□□□□ 0.97
INO80DQ53TQ3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.08■□□□□ 0.97
INO80DQ53TQ3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
INO80DQ53TQ3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.08■□□□□ 0.97
INO80DQ53TQ3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.08■□□□□ 0.97
INO80DQ53TQ3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
INO80DQ53TQ3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.08■□□□□ 0.96
INO80DQ53TQ3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
INO80DQ53TQ3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
INO80DQ53TQ3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
INO80DQ53TQ3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
INO80DQ53TQ3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
INO80DQ53TQ3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms