Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col10a1Q05306 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col10a1Q05306 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col10a1Q05306 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Col10a1Q05306 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.75■□□□□ 0.27
Col10a1Q05306 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.75■□□□□ 0.27
Col10a1Q05306 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col10a1Q05306 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col10a1Q05306 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col10a1Q05306 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
Col10a1Q05306 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col10a1Q05306 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col10a1Q05306 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col10a1Q05306 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col10a1Q05306 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col10a1Q05306 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col10a1Q05306 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col10a1Q05306 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Col10a1Q05306 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.74■□□□□ 0.27
Col10a1Q05306 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.74■□□□□ 0.27
Col10a1Q05306 Gm4968-201ENSMUST00000071458 858 ntBASIC16.74■□□□□ 0.27
Col10a1Q05306 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col10a1Q05306 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col10a1Q05306 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col10a1Q05306 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col10a1Q05306 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col10a1Q05306 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col10a1Q05306 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col10a1Q05306 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col10a1Q05306 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Col10a1Q05306 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.74■□□□□ 0.27
Col10a1Q05306 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col10a1Q05306 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col10a1Q05306 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col10a1Q05306 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Col10a1Q05306 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col10a1Q05306 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Col10a1Q05306 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Col10a1Q05306 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col10a1Q05306 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.73■□□□□ 0.27
Col10a1Q05306 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col10a1Q05306 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col10a1Q05306 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col10a1Q05306 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.73■□□□□ 0.27
Col10a1Q05306 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col10a1Q05306 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.73■□□□□ 0.27
Col10a1Q05306 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.73■□□□□ 0.27
Col10a1Q05306 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col10a1Q05306 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.73■□□□□ 0.27
Col10a1Q05306 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col10a1Q05306 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col10a1Q05306 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Col10a1Q05306 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col10a1Q05306 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col10a1Q05306 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col10a1Q05306 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col10a1Q05306 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Col10a1Q05306 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Col10a1Q05306 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.72■□□□□ 0.27
Col10a1Q05306 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.72■□□□□ 0.27
Col10a1Q05306 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Col10a1Q05306 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col10a1Q05306 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col10a1Q05306 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col10a1Q05306 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col10a1Q05306 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col10a1Q05306 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col10a1Q05306 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col10a1Q05306 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col10a1Q05306 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.71■□□□□ 0.27
Col10a1Q05306 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Col10a1Q05306 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col10a1Q05306 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.71■□□□□ 0.27
Col10a1Q05306 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Col10a1Q05306 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.71■□□□□ 0.27
Col10a1Q05306 Gm44549-201ENSMUST00000208351 577 ntBASIC16.71■□□□□ 0.27
Col10a1Q05306 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col10a1Q05306 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col10a1Q05306 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col10a1Q05306 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col10a1Q05306 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Col10a1Q05306 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col10a1Q05306 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col10a1Q05306 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.71■□□□□ 0.27
Col10a1Q05306 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col10a1Q05306 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col10a1Q05306 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col10a1Q05306 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.7■□□□□ 0.26
Col10a1Q05306 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col10a1Q05306 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col10a1Q05306 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col10a1Q05306 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col10a1Q05306 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col10a1Q05306 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col10a1Q05306 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col10a1Q05306 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col10a1Q05306 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.7■□□□□ 0.26
Col10a1Q05306 Gm12441-201ENSMUST00000121806 588 ntBASIC16.7■□□□□ 0.26
Col10a1Q05306 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.7■□□□□ 0.26
Col10a1Q05306 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms