Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ABCA4P78363 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ABCA4P78363 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ABCA4P78363 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
ABCA4P78363 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ABCA4P78363 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ABCA4P78363 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.91■□□□□ 0.46
ABCA4P78363 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ABCA4P78363 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ABCA4P78363 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.91■□□□□ 0.46
ABCA4P78363 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.91■□□□□ 0.46
ABCA4P78363 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ABCA4P78363 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ABCA4P78363 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ABCA4P78363 PNMA6B-201ENST00000538162 1200 ntBASIC17.91■□□□□ 0.46
ABCA4P78363 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ABCA4P78363 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.9■□□□□ 0.46
ABCA4P78363 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.9■□□□□ 0.46
ABCA4P78363 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ABCA4P78363 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ABCA4P78363 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
ABCA4P78363 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ABCA4P78363 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.9■□□□□ 0.46
ABCA4P78363 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.9■□□□□ 0.46
ABCA4P78363 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.9■□□□□ 0.46
ABCA4P78363 AL589743.5-201ENST00000616611 1050 ntBASIC17.9■□□□□ 0.46
ABCA4P78363 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.9■□□□□ 0.46
ABCA4P78363 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
ABCA4P78363 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ABCA4P78363 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
ABCA4P78363 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ABCA4P78363 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ABCA4P78363 MCRIP2P1-201ENST00000394346 511 ntBASIC17.89■□□□□ 0.46
ABCA4P78363 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.89■□□□□ 0.46
ABCA4P78363 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.89■□□□□ 0.46
ABCA4P78363 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
ABCA4P78363 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.46
ABCA4P78363 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.89■□□□□ 0.45
ABCA4P78363 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.89■□□□□ 0.45
ABCA4P78363 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCA4P78363 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ABCA4P78363 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
ABCA4P78363 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.89■□□□□ 0.45
ABCA4P78363 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ABCA4P78363 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
ABCA4P78363 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCA4P78363 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ABCA4P78363 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCA4P78363 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ABCA4P78363 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.89■□□□□ 0.45
ABCA4P78363 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCA4P78363 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCA4P78363 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.88■□□□□ 0.45
ABCA4P78363 LINC01023-201ENST00000606054 436 ntBASIC17.88■□□□□ 0.45
ABCA4P78363 AC069544.1-201ENST00000609399 999 ntBASIC17.88■□□□□ 0.45
ABCA4P78363 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCA4P78363 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCA4P78363 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.88■□□□□ 0.45
ABCA4P78363 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.88■□□□□ 0.45
ABCA4P78363 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ABCA4P78363 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCA4P78363 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
ABCA4P78363 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCA4P78363 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCA4P78363 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCA4P78363 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ABCA4P78363 AC091799.1-201ENST00000422823 811 ntBASIC17.88■□□□□ 0.45
ABCA4P78363 AC007322.3-201ENST00000426526 701 ntBASIC17.88■□□□□ 0.45
ABCA4P78363 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
ABCA4P78363 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.88■□□□□ 0.45
ABCA4P78363 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.88■□□□□ 0.45
ABCA4P78363 AC060766.5-201ENST00000590539 871 ntBASIC17.88■□□□□ 0.45
ABCA4P78363 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ABCA4P78363 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.88■□□□□ 0.45
ABCA4P78363 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCA4P78363 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.88■□□□□ 0.45
ABCA4P78363 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.88■□□□□ 0.45
ABCA4P78363 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.88■□□□□ 0.45
ABCA4P78363 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.87■□□□□ 0.45
ABCA4P78363 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ABCA4P78363 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.87■□□□□ 0.45
ABCA4P78363 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.87■□□□□ 0.45
ABCA4P78363 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ABCA4P78363 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ABCA4P78363 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ABCA4P78363 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.87■□□□□ 0.45
ABCA4P78363 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ABCA4P78363 AC068473.5-201ENST00000616428 2072 ntBASIC17.87■□□□□ 0.45
ABCA4P78363 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ABCA4P78363 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ABCA4P78363 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ABCA4P78363 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ABCA4P78363 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ABCA4P78363 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.87■□□□□ 0.45
ABCA4P78363 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.87■□□□□ 0.45
ABCA4P78363 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ABCA4P78363 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ABCA4P78363 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
ABCA4P78363 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ABCA4P78363 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms