Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 GCV2YMR189W 3105 nt2.44□□□□□ -2.02
RAD3P06839 GCD2YGR083C 1956 nt2.43□□□□□ -2.02
RAD3P06839 MDM36YPR083W 1740 nt2.43□□□□□ -2.02
RAD3P06839 NUP170YBL079W 4509 nt2.43□□□□□ -2.02
RAD3P06839 YDR124WYDR124W 975 nt2.43□□□□□ -2.02
RAD3P06839 CPR5YDR304C 678 nt2.43□□□□□ -2.02
RAD3P06839 SEM1YDR363W-A 270 nt2.43□□□□□ -2.02
RAD3P06839 YIL156W-BYIL156W-B 222 nt2.43□□□□□ -2.02
RAD3P06839 LIP2YLR239C 987 nt2.43□□□□□ -2.02
RAD3P06839 YMR099CYMR099C 894 nt2.43□□□□□ -2.02
RAD3P06839 PNO1YOR145C 825 nt2.43□□□□□ -2.02
RAD3P06839 GUP1YGL084C 1683 nt2.43□□□□□ -2.02
RAD3P06839 DBF20YPR111W 1695 nt2.43□□□□□ -2.02
RAD3P06839 TOR1YJR066W 7413 nt2.43□□□□□ -2.02
RAD3P06839 BIT61YJL058C 1632 nt2.42□□□□□ -2.02
RAD3P06839 HOP1YIL072W 1818 nt2.42□□□□□ -2.02
RAD3P06839 MDM10YAL010C 1482 nt2.42□□□□□ -2.02
RAD3P06839 SNU23YDL098C 585 nt2.42□□□□□ -2.02
RAD3P06839 YHR180W-AYHR180W-A 183 nt2.42□□□□□ -2.02
RAD3P06839 YHR212CYHR212C 336 nt2.42□□□□□ -2.02
RAD3P06839 YAR060CYAR060C 336 nt2.42□□□□□ -2.02
RAD3P06839 RPS1AYLR441C 768 nt2.42□□□□□ -2.02
RAD3P06839 ALG14YBR070C 714 nt2.42□□□□□ -2.02
RAD3P06839 ICS2YBR157C 768 nt2.42□□□□□ -2.02
RAD3P06839 snR35snR35 204 nt2.42□□□□□ -2.02
RAD3P06839 YBR292CYBR292C 372 nt2.42□□□□□ -2.02
RAD3P06839 SCP160YJL080C 3669 nt2.42□□□□□ -2.02
RAD3P06839 SLN1YIL147C 3663 nt2.41□□□□□ -2.02
RAD3P06839 YBT1YLL048C 4986 nt2.41□□□□□ -2.02
RAD3P06839 UBP1YDL122W 2430 nt2.41□□□□□ -2.02
RAD3P06839 RGI1YER067W 486 nt2.41□□□□□ -2.02
RAD3P06839 YAL059C-AYAL059C-A 423 nt2.41□□□□□ -2.02
RAD3P06839 CWC24YLR323C 780 nt2.41□□□□□ -2.02
RAD3P06839 AIM32YML050W 936 nt2.41□□□□□ -2.02
RAD3P06839 YNL276CYNL276C 396 nt2.41□□□□□ -2.02
RAD3P06839 COQ10YOL008W 624 nt2.41□□□□□ -2.02
RAD3P06839 YOL118CYOL118C 309 nt2.41□□□□□ -2.02
RAD3P06839 ANR2YKL047W 1551 nt2.4□□□□□ -2.02
RAD3P06839 DSE1YER124C 1722 nt2.4□□□□□ -2.02
RAD3P06839 RRP12YPL012W 3687 nt2.4□□□□□ -2.03
RAD3P06839 YIL068W-AYIL068W-A 384 nt2.4□□□□□ -2.03
RAD3P06839 ALB1YJL122W 528 nt2.4□□□□□ -2.03
RAD3P06839 PML39YML107C 1005 nt2.4□□□□□ -2.03
RAD3P06839 DLT1YMR126C 1029 nt2.4□□□□□ -2.03
RAD3P06839 YBL055CYBL055C 1257 nt2.4□□□□□ -2.03
RAD3P06839 CSH1YBR161W 1131 nt2.4□□□□□ -2.03
RAD3P06839 STH1YIL126W 4080 nt2.4□□□□□ -2.03
RAD3P06839 INO80YGL150C 4470 nt2.4□□□□□ -2.03
RAD3P06839 KAP123YER110C 3342 nt2.39□□□□□ -2.03
RAD3P06839 PHO91YNR013C 2685 nt2.39□□□□□ -2.03
RAD3P06839 YCR064CYCR064C 411 nt2.39□□□□□ -2.03
RAD3P06839 VTC1YER072W 390 nt2.39□□□□□ -2.03
RAD3P06839 YIL046W-AYIL046W-A 165 nt2.39□□□□□ -2.03
RAD3P06839 AIM36YMR157C 768 nt2.39□□□□□ -2.03
RAD3P06839 TFB6YOR352W 1032 nt2.39□□□□□ -2.03
RAD3P06839 ISU1YPL135W 498 nt2.39□□□□□ -2.03
RAD3P06839 AGE1YDR524C 1449 nt2.39□□□□□ -2.03
RAD3P06839 MRP10YDL045W-A 288 nt2.38□□□□□ -2.03
RAD3P06839 SAE2YGL175C 1038 nt2.38□□□□□ -2.03
RAD3P06839 NOP19YGR251W 591 nt2.38□□□□□ -2.03
RAD3P06839 OTU2YHL013C 924 nt2.38□□□□□ -2.03
RAD3P06839 YHL044WYHL044W 708 nt2.38□□□□□ -2.03
RAD3P06839 LSM12YHR121W 564 nt2.38□□□□□ -2.03
RAD3P06839 RMP1YLR145W 606 nt2.38□□□□□ -2.03
RAD3P06839 RPS29AYLR388W 171 nt2.38□□□□□ -2.03
RAD3P06839 CTL1YMR180C 963 nt2.38□□□□□ -2.03
RAD3P06839 RPL25YOL127W 429 nt2.38□□□□□ -2.03
RAD3P06839 SCD5YOR329C 2619 nt2.38□□□□□ -2.03
RAD3P06839 APL5YPL195W 2799 nt2.38□□□□□ -2.03
RAD3P06839 ERT1YBR239C 1590 nt2.38□□□□□ -2.03
RAD3P06839 MSB1YOR188W 3414 nt2.38□□□□□ -2.03
RAD3P06839 YDR170W-AYDR170W-A 1323 nt2.38□□□□□ -2.03
RAD3P06839 YBL005W-AYBL005W-A 1323 nt2.38□□□□□ -2.03
RAD3P06839 YMR046CYMR046C 1323 nt2.38□□□□□ -2.03
RAD3P06839 YNL284C-AYNL284C-A 1323 nt2.38□□□□□ -2.03
RAD3P06839 UBX3YDL091C 1368 nt2.37□□□□□ -2.03
RAD3P06839 SYO1YDL063C 1863 nt2.37□□□□□ -2.03
RAD3P06839 TRM2YKR056W 1920 nt2.37□□□□□ -2.03
RAD3P06839 YCR016WYCR016W 873 nt2.37□□□□□ -2.03
RAD3P06839 YPD1YDL235C 504 nt2.37□□□□□ -2.03
RAD3P06839 TMN3YER113C 2121 nt2.37□□□□□ -2.03
RAD3P06839 AAD16YFL057C 459 nt2.37□□□□□ -2.03
RAD3P06839 VMA10YHR039C-A 345 nt2.37□□□□□ -2.03
RAD3P06839 LCL2YLR104W 396 nt2.37□□□□□ -2.03
RAD3P06839 YOR277CYOR277C 309 nt2.37□□□□□ -2.03
RAD3P06839 YCL023CYCL023C 348 nt2.37□□□□□ -2.03
RAD3P06839 YLR108CYLR108C 1458 nt2.37□□□□□ -2.03
RAD3P06839 NOP56YLR197W 1515 nt2.37□□□□□ -2.03
RAD3P06839 NOP14YDL148C 2433 nt2.37□□□□□ -2.03
RAD3P06839 KRE33YNL132W 3171 nt2.37□□□□□ -2.03
RAD3P06839 ARK1YNL020C 1917 nt2.36□□□□□ -2.03
RAD3P06839 NRG1YDR043C 696 nt2.36□□□□□ -2.03
RAD3P06839 YFR032C-BYFR032C-B 264 nt2.36□□□□□ -2.03
RAD3P06839 ARC18YLR370C 537 nt2.36□□□□□ -2.03
RAD3P06839 YMR181CYMR181C 465 nt2.36□□□□□ -2.03
RAD3P06839 YOL134CYOL134C 390 nt2.36□□□□□ -2.03
RAD3P06839 BAG7YOR134W 1230 nt2.36□□□□□ -2.03
RAD3P06839 RPN8YOR261C 1017 nt2.36□□□□□ -2.03
RAD3P06839 DGK1YOR311C 873 nt2.36□□□□□ -2.03
RAD3P06839 YPL142CYPL142C 318 nt2.36□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 33.2 ms