Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Hdac1O09106 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hdac1O09106 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hdac1O09106 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Hdac1O09106 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
Hdac1O09106 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hdac1O09106 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Hdac1O09106 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hdac1O09106 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hdac1O09106 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Hdac1O09106 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Hdac1O09106 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.69■■□□□ 1.06
Hdac1O09106 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.69■■□□□ 1.06
Hdac1O09106 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.69■■□□□ 1.06
Hdac1O09106 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hdac1O09106 Gm15635-204ENSMUST00000208024 2539 ntBASIC21.69■■□□□ 1.06
Hdac1O09106 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hdac1O09106 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
Hdac1O09106 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.68■■□□□ 1.06
Hdac1O09106 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Hdac1O09106 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hdac1O09106 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.68■■□□□ 1.06
Hdac1O09106 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC21.68■■□□□ 1.06
Hdac1O09106 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hdac1O09106 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hdac1O09106 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Hdac1O09106 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hdac1O09106 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Hdac1O09106 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Hdac1O09106 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Hdac1O09106 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hdac1O09106 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hdac1O09106 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hdac1O09106 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hdac1O09106 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hdac1O09106 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Hdac1O09106 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
Hdac1O09106 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Hdac1O09106 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.66■■□□□ 1.06
Hdac1O09106 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.66■■□□□ 1.06
Hdac1O09106 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Hdac1O09106 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hdac1O09106 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hdac1O09106 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Hdac1O09106 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.66■■□□□ 1.06
Hdac1O09106 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hdac1O09106 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hdac1O09106 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC21.65■■□□□ 1.06
Hdac1O09106 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hdac1O09106 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Hdac1O09106 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hdac1O09106 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hdac1O09106 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC21.65■■□□□ 1.06
Hdac1O09106 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hdac1O09106 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hdac1O09106 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
Hdac1O09106 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Hdac1O09106 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.65■■□□□ 1.06
Hdac1O09106 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hdac1O09106 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hdac1O09106 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Hdac1O09106 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Hdac1O09106 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Hdac1O09106 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Hdac1O09106 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Hdac1O09106 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hdac1O09106 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Hdac1O09106 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Hdac1O09106 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Hdac1O09106 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Hdac1O09106 Gm9988-201ENSMUST00000069786 435 ntBASIC21.64■■□□□ 1.05
Hdac1O09106 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hdac1O09106 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hdac1O09106 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Hdac1O09106 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hdac1O09106 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hdac1O09106 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.63■■□□□ 1.05
Hdac1O09106 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Hdac1O09106 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.63■■□□□ 1.05
Hdac1O09106 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.63■■□□□ 1.05
Hdac1O09106 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Hdac1O09106 Gm37194-201ENSMUST00000193092 3031 ntBASIC21.63■■□□□ 1.05
Hdac1O09106 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hdac1O09106 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Hdac1O09106 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hdac1O09106 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hdac1O09106 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Hdac1O09106 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Hdac1O09106 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hdac1O09106 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hdac1O09106 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Hdac1O09106 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hdac1O09106 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Hdac1O09106 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hdac1O09106 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hdac1O09106 Gm22325-201ENSMUST00000158904 308 ntBASIC21.62■■□□□ 1.05
Hdac1O09106 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Hdac1O09106 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Hdac1O09106 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hdac1O09106 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms