Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rsph3bQ9DA80 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rsph3bQ9DA80 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rsph3bQ9DA80 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.97■□□□□ 0.79
Rsph3bQ9DA80 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.97■□□□□ 0.79
Rsph3bQ9DA80 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.97■□□□□ 0.79
Rsph3bQ9DA80 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rsph3bQ9DA80 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rsph3bQ9DA80 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rsph3bQ9DA80 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rsph3bQ9DA80 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rsph3bQ9DA80 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rsph3bQ9DA80 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rsph3bQ9DA80 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rsph3bQ9DA80 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rsph3bQ9DA80 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.96■□□□□ 0.79
Rsph3bQ9DA80 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Rsph3bQ9DA80 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.96■□□□□ 0.79
Rsph3bQ9DA80 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rsph3bQ9DA80 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rsph3bQ9DA80 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rsph3bQ9DA80 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rsph3bQ9DA80 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rsph3bQ9DA80 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.96■□□□□ 0.79
Rsph3bQ9DA80 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rsph3bQ9DA80 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph3bQ9DA80 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph3bQ9DA80 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph3bQ9DA80 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph3bQ9DA80 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Rsph3bQ9DA80 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.95■□□□□ 0.78
Rsph3bQ9DA80 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph3bQ9DA80 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph3bQ9DA80 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph3bQ9DA80 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rsph3bQ9DA80 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph3bQ9DA80 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph3bQ9DA80 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph3bQ9DA80 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph3bQ9DA80 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.95■□□□□ 0.78
Rsph3bQ9DA80 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph3bQ9DA80 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Rsph3bQ9DA80 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph3bQ9DA80 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rsph3bQ9DA80 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.94■□□□□ 0.78
Rsph3bQ9DA80 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rsph3bQ9DA80 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rsph3bQ9DA80 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Rsph3bQ9DA80 Mir7071-201ENSMUST00000184847 69 ntBASIC19.94■□□□□ 0.78
Rsph3bQ9DA80 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.94■□□□□ 0.78
Rsph3bQ9DA80 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rsph3bQ9DA80 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.94■□□□□ 0.78
Rsph3bQ9DA80 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.94■□□□□ 0.78
Rsph3bQ9DA80 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.94■□□□□ 0.78
Rsph3bQ9DA80 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rsph3bQ9DA80 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rsph3bQ9DA80 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rsph3bQ9DA80 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rsph3bQ9DA80 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rsph3bQ9DA80 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rsph3bQ9DA80 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rsph3bQ9DA80 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rsph3bQ9DA80 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rsph3bQ9DA80 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rsph3bQ9DA80 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.93■□□□□ 0.78
Rsph3bQ9DA80 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.93■□□□□ 0.78
Rsph3bQ9DA80 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rsph3bQ9DA80 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rsph3bQ9DA80 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.93■□□□□ 0.78
Rsph3bQ9DA80 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rsph3bQ9DA80 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rsph3bQ9DA80 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rsph3bQ9DA80 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rsph3bQ9DA80 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Rsph3bQ9DA80 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rsph3bQ9DA80 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rsph3bQ9DA80 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Rsph3bQ9DA80 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rsph3bQ9DA80 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.92■□□□□ 0.78
Rsph3bQ9DA80 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.92■□□□□ 0.78
Rsph3bQ9DA80 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rsph3bQ9DA80 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.92■□□□□ 0.78
Rsph3bQ9DA80 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Rsph3bQ9DA80 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rsph3bQ9DA80 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Rsph3bQ9DA80 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rsph3bQ9DA80 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Rsph3bQ9DA80 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rsph3bQ9DA80 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Rsph3bQ9DA80 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rsph3bQ9DA80 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rsph3bQ9DA80 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rsph3bQ9DA80 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rsph3bQ9DA80 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.91■□□□□ 0.78
Rsph3bQ9DA80 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.91■□□□□ 0.78
Rsph3bQ9DA80 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.91■□□□□ 0.78
Rsph3bQ9DA80 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Rsph3bQ9DA80 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rsph3bQ9DA80 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rsph3bQ9DA80 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms