Protein–RNA interactions for Protein: Q99231

TY1B-DR3, Transposon Ty1-DR3 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR3Q99231 SHE9YDR393W 1371 nt1.96□□□□□ -2.09
TY1B-DR3Q99231 YOL166CYOL166C 339 nt1.96□□□□□ -2.1
TY1B-DR3Q99231 POL5YEL055C 3069 nt1.96□□□□□ -2.1
TY1B-DR3Q99231 YDR034C-DYDR034C-D 5313 nt1.96□□□□□ -2.1
TY1B-DR3Q99231 YLR410W-BYLR410W-B 5313 nt1.96□□□□□ -2.1
TY1B-DR3Q99231 RRF1YHR038W 693 nt1.95□□□□□ -2.1
TY1B-DR3Q99231 SPH1YLR313C 1593 nt1.95□□□□□ -2.1
TY1B-DR3Q99231 RPS29AYLR388W 171 nt1.95□□□□□ -2.1
TY1B-DR3Q99231 UTP5YDR398W 1932 nt1.95□□□□□ -2.1
TY1B-DR3Q99231 TCM62YBR044C 1719 nt1.95□□□□□ -2.1
TY1B-DR3Q99231 SPP382YLR424W 2127 nt1.95□□□□□ -2.1
TY1B-DR3Q99231 BUR6YER159C 429 nt1.95□□□□□ -2.1
TY1B-DR3Q99231 RMP1YLR145W 606 nt1.95□□□□□ -2.1
TY1B-DR3Q99231 CNS1YBR155W 1158 nt1.95□□□□□ -2.1
TY1B-DR3Q99231 YRR1YOR162C 2433 nt1.94□□□□□ -2.1
TY1B-DR3Q99231 YFL002W-AYFL002W-A 5313 nt1.94□□□□□ -2.1
TY1B-DR3Q99231 YGR161W-BYGR161W-B 5313 nt1.94□□□□□ -2.1
TY1B-DR3Q99231 YCL019WYCL019W 5313 nt1.94□□□□□ -2.1
TY1B-DR3Q99231 PLC1YPL268W 2610 nt1.94□□□□□ -2.1
TY1B-DR3Q99231 YLR035C-AYLR035C-A 3468 nt1.94□□□□□ -2.1
TY1B-DR3Q99231 PRP18YGR006W 756 nt1.94□□□□□ -2.1
TY1B-DR3Q99231 EST3YIL009C-A 546 nt1.94□□□□□ -2.1
TY1B-DR3Q99231 CTK2YJL006C 972 nt1.94□□□□□ -2.1
TY1B-DR3Q99231 CYC2YOR037W 1101 nt1.94□□□□□ -2.1
TY1B-DR3Q99231 SYH1YPL105C 2550 nt1.94□□□□□ -2.1
TY1B-DR3Q99231 YPK3YBR028C 1578 nt1.94□□□□□ -2.1
TY1B-DR3Q99231 YHR214C-CYHR214C-C 1437 nt1.93□□□□□ -2.1
TY1B-DR3Q99231 MDM32YOR147W 1869 nt1.93□□□□□ -2.1
TY1B-DR3Q99231 YDR169C-AYDR169C-A 150 nt1.93□□□□□ -2.1
TY1B-DR3Q99231 INA22YIR024C 651 nt1.93□□□□□ -2.1
TY1B-DR3Q99231 ESF2YNR054C 951 nt1.93□□□□□ -2.1
TY1B-DR3Q99231 VPS3YDR495C 3036 nt1.93□□□□□ -2.1
TY1B-DR3Q99231 ISF1YMR081C 1017 nt1.93□□□□□ -2.1
TY1B-DR3Q99231 YCK2YNL154C 1641 nt1.92□□□□□ -2.1
TY1B-DR3Q99231 SPS2YDR522C 1509 nt1.92□□□□□ -2.1
TY1B-DR3Q99231 DBP5YOR046C 1449 nt1.92□□□□□ -2.1
TY1B-DR3Q99231 PET100YDR079W 336 nt1.92□□□□□ -2.1
TY1B-DR3Q99231 RDS2YPL133C 1341 nt1.91□□□□□ -2.1
TY1B-DR3Q99231 GRX3YDR098C 858 nt1.91□□□□□ -2.1
TY1B-DR3Q99231 VPH2YKL119C 648 nt1.91□□□□□ -2.1
TY1B-DR3Q99231 CRS5YOR031W 210 nt1.91□□□□□ -2.1
TY1B-DR3Q99231 RIX1YHR197W 2292 nt1.91□□□□□ -2.1
TY1B-DR3Q99231 EPO1YMR124W 2832 nt1.91□□□□□ -2.1
TY1B-DR3Q99231 UBC6YER100W 753 nt1.9□□□□□ -2.1
TY1B-DR3Q99231 HOP1YIL072W 1818 nt1.9□□□□□ -2.11
TY1B-DR3Q99231 PLP1YDR183W 693 nt1.9□□□□□ -2.11
TY1B-DR3Q99231 SNO3YFL060C 669 nt1.9□□□□□ -2.11
TY1B-DR3Q99231 SNO2YNL334C 669 nt1.9□□□□□ -2.11
TY1B-DR3Q99231 UFD2YDL190C 2886 nt1.89□□□□□ -2.11
TY1B-DR3Q99231 YDR179W-AYDR179W-A 1392 nt1.89□□□□□ -2.11
TY1B-DR3Q99231 PKH3YDR466W 2697 nt1.89□□□□□ -2.11
TY1B-DR3Q99231 AFI1YOR129C 2682 nt1.89□□□□□ -2.11
TY1B-DR3Q99231 GRX1YCL035C 333 nt1.89□□□□□ -2.11
TY1B-DR3Q99231 IRC21YMR073C 606 nt1.88□□□□□ -2.11
TY1B-DR3Q99231 YOR292CYOR292C 930 nt1.88□□□□□ -2.11
TY1B-DR3Q99231 HAL1YPR005C 885 nt1.88□□□□□ -2.11
TY1B-DR3Q99231 VHR1YIL056W 1923 nt1.88□□□□□ -2.11
TY1B-DR3Q99231 PHO5YBR093C 1404 nt1.88□□□□□ -2.11
TY1B-DR3Q99231 ALE1YOR175C 1860 nt1.88□□□□□ -2.11
TY1B-DR3Q99231 TRM112YNR046W 408 nt1.87□□□□□ -2.11
TY1B-DR3Q99231 RGP1YDR137W 1992 nt1.87□□□□□ -2.11
TY1B-DR3Q99231 SIP4YJL089W 2490 nt1.87□□□□□ -2.11
TY1B-DR3Q99231 UBR1YGR184C 5853 nt1.87□□□□□ -2.11
TY1B-DR3Q99231 DDI2YFL061W 678 nt1.87□□□□□ -2.11
TY1B-DR3Q99231 YIL156W-AYIL156W-A 402 nt1.87□□□□□ -2.11
TY1B-DR3Q99231 RNA1YMR235C 1224 nt1.87□□□□□ -2.11
TY1B-DR3Q99231 YJR061WYJR061W 2808 nt1.86□□□□□ -2.11
TY1B-DR3Q99231 EAF7YNL136W 1278 nt1.86□□□□□ -2.11
TY1B-DR3Q99231 CTP1YBR291C 900 nt1.86□□□□□ -2.11
TY1B-DR3Q99231 UTP20YBL004W 7482 nt1.85□□□□□ -2.11
TY1B-DR3Q99231 CTH1YDR151C 978 nt1.85□□□□□ -2.11
TY1B-DR3Q99231 tF(GAA)BtF(GAA)B 73 nt1.85□□□□□ -2.11
TY1B-DR3Q99231 tF(GAA)FtF(GAA)F 73 nt1.85□□□□□ -2.11
TY1B-DR3Q99231 tF(GAA)GtF(GAA)G 73 nt1.85□□□□□ -2.11
TY1B-DR3Q99231 tF(GAA)H1tF(GAA)H1 73 nt1.85□□□□□ -2.11
TY1B-DR3Q99231 tF(GAA)H2tF(GAA)H2 73 nt1.85□□□□□ -2.11
TY1B-DR3Q99231 tF(GAA)MtF(GAA)M 73 nt1.85□□□□□ -2.11
TY1B-DR3Q99231 tF(GAA)P1tF(GAA)P1 73 nt1.85□□□□□ -2.11
TY1B-DR3Q99231 tF(GAA)P2tF(GAA)P2 73 nt1.85□□□□□ -2.11
TY1B-DR3Q99231 YER067C-AYER067C-A 324 nt1.85□□□□□ -2.11
TY1B-DR3Q99231 RPL33BYOR234C 324 nt1.85□□□□□ -2.11
TY1B-DR3Q99231 FYV8YGR196C 2454 nt1.85□□□□□ -2.11
TY1B-DR3Q99231 OCT1YKL134C 2319 nt1.85□□□□□ -2.11
TY1B-DR3Q99231 MRPL9YGR220C 810 nt1.85□□□□□ -2.11
TY1B-DR3Q99231 YLR224WYLR224W 1110 nt1.85□□□□□ -2.11
TY1B-DR3Q99231 MRPL27YBR282W 441 nt1.85□□□□□ -2.11
TY1B-DR3Q99231 CDC53YDL132W 2448 nt1.84□□□□□ -2.11
TY1B-DR3Q99231 YCR087C-AYCR087C-A 462 nt1.84□□□□□ -2.12
TY1B-DR3Q99231 RPN9YDR427W 1182 nt1.84□□□□□ -2.12
TY1B-DR3Q99231 SUR1YPL057C 1149 nt1.84□□□□□ -2.12
TY1B-DR3Q99231 KCS1YDR017C 3153 nt1.83□□□□□ -2.12
TY1B-DR3Q99231 BEM2YER155C 6504 nt1.83□□□□□ -2.12
TY1B-DR3Q99231 DIA2YOR080W 2199 nt1.83□□□□□ -2.12
TY1B-DR3Q99231 AEP2YMR282C 1743 nt1.83□□□□□ -2.12
TY1B-DR3Q99231 YCK3YER123W 1575 nt1.83□□□□□ -2.12
TY1B-DR3Q99231 YLR416CYLR416C 399 nt1.82□□□□□ -2.12
TY1B-DR3Q99231 INP51YIL002C 2841 nt1.82□□□□□ -2.12
TY1B-DR3Q99231 IOC4YMR044W 1428 nt1.82□□□□□ -2.12
TY1B-DR3Q99231 YGR160WYGR160W 612 nt1.82□□□□□ -2.12
TY1B-DR3Q99231 VMA10YHR039C-A 345 nt1.82□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 38 ms