Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb2Q91Y00 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhb2Q91Y00 BC021767-201ENSMUST00000126387 1716 ntBASIC19.4■□□□□ 0.7
Pcdhb2Q91Y00 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb2Q91Y00 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb2Q91Y00 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb2Q91Y00 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.4■□□□□ 0.7
Pcdhb2Q91Y00 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb2Q91Y00 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.4■□□□□ 0.7
Pcdhb2Q91Y00 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb2Q91Y00 Gm44549-201ENSMUST00000208351 577 ntBASIC19.4■□□□□ 0.7
Pcdhb2Q91Y00 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb2Q91Y00 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb2Q91Y00 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb2Q91Y00 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb2Q91Y00 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb2Q91Y00 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb2Q91Y00 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.4■□□□□ 0.7
Pcdhb2Q91Y00 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Pcdhb2Q91Y00 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhb2Q91Y00 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb2Q91Y00 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb2Q91Y00 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb2Q91Y00 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.39■□□□□ 0.69
Pcdhb2Q91Y00 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb2Q91Y00 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb2Q91Y00 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb2Q91Y00 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb2Q91Y00 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.39■□□□□ 0.69
Pcdhb2Q91Y00 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb2Q91Y00 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb2Q91Y00 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Pcdhb2Q91Y00 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb2Q91Y00 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb2Q91Y00 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb2Q91Y00 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb2Q91Y00 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhb2Q91Y00 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhb2Q91Y00 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb2Q91Y00 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhb2Q91Y00 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhb2Q91Y00 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb2Q91Y00 Gm2559-201ENSMUST00000201323 363 ntBASIC19.38■□□□□ 0.69
Pcdhb2Q91Y00 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb2Q91Y00 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.38■□□□□ 0.69
Pcdhb2Q91Y00 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb2Q91Y00 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhb2Q91Y00 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb2Q91Y00 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb2Q91Y00 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb2Q91Y00 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb2Q91Y00 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb2Q91Y00 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Pcdhb2Q91Y00 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb2Q91Y00 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb2Q91Y00 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb2Q91Y00 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pcdhb2Q91Y00 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.37■□□□□ 0.69
Pcdhb2Q91Y00 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb2Q91Y00 Gm22325-201ENSMUST00000158904 308 ntBASIC19.37■□□□□ 0.69
Pcdhb2Q91Y00 Gm20049-201ENSMUST00000219950 730 ntBASIC19.37■□□□□ 0.69
Pcdhb2Q91Y00 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdhb2Q91Y00 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb2Q91Y00 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb2Q91Y00 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb2Q91Y00 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdhb2Q91Y00 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb2Q91Y00 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb2Q91Y00 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Pcdhb2Q91Y00 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pcdhb2Q91Y00 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.36■□□□□ 0.69
Pcdhb2Q91Y00 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb2Q91Y00 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb2Q91Y00 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb2Q91Y00 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb2Q91Y00 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Pcdhb2Q91Y00 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb2Q91Y00 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb2Q91Y00 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pcdhb2Q91Y00 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb2Q91Y00 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Pcdhb2Q91Y00 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb2Q91Y00 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb2Q91Y00 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb2Q91Y00 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb2Q91Y00 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb2Q91Y00 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb2Q91Y00 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdhb2Q91Y00 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb2Q91Y00 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb2Q91Y00 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb2Q91Y00 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pcdhb2Q91Y00 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb2Q91Y00 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb2Q91Y00 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.35■□□□□ 0.69
Pcdhb2Q91Y00 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhb2Q91Y00 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb2Q91Y00 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb2Q91Y00 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb2Q91Y00 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 208.5 ms