Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lrif1Q8CDD9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Gm11421-201ENSMUST00000122124 294 ntBASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lrif1Q8CDD9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Lrif1Q8CDD9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lrif1Q8CDD9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Lrif1Q8CDD9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lrif1Q8CDD9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Lrif1Q8CDD9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lrif1Q8CDD9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Lrif1Q8CDD9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lrif1Q8CDD9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lrif1Q8CDD9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.02■□□□□ 0.48
Lrif1Q8CDD9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Lrif1Q8CDD9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Lrif1Q8CDD9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.02■□□□□ 0.48
Lrif1Q8CDD9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Lrif1Q8CDD9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lrif1Q8CDD9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Lrif1Q8CDD9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Lrif1Q8CDD9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lrif1Q8CDD9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lrif1Q8CDD9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
Lrif1Q8CDD9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrif1Q8CDD9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.01■□□□□ 0.47
Lrif1Q8CDD9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrif1Q8CDD9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.01■□□□□ 0.47
Lrif1Q8CDD9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.01■□□□□ 0.47
Lrif1Q8CDD9 Gm40848-201ENSMUST00000221998 324 ntBASIC18.01■□□□□ 0.47
Lrif1Q8CDD9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Lrif1Q8CDD9 Gm10493-201ENSMUST00000097270 612 ntBASIC18.01■□□□□ 0.47
Lrif1Q8CDD9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Lrif1Q8CDD9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.01■□□□□ 0.47
Lrif1Q8CDD9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrif1Q8CDD9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrif1Q8CDD9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrif1Q8CDD9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrif1Q8CDD9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lrif1Q8CDD9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Lrif1Q8CDD9 Gm43294-201ENSMUST00000202850 2490 ntBASIC18■□□□□ 0.47
Lrif1Q8CDD9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lrif1Q8CDD9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Lrif1Q8CDD9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18■□□□□ 0.47
Lrif1Q8CDD9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lrif1Q8CDD9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Lrif1Q8CDD9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lrif1Q8CDD9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lrif1Q8CDD9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Lrif1Q8CDD9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lrif1Q8CDD9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lrif1Q8CDD9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lrif1Q8CDD9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lrif1Q8CDD9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lrif1Q8CDD9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lrif1Q8CDD9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Lrif1Q8CDD9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18■□□□□ 0.47
Lrif1Q8CDD9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lrif1Q8CDD9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18■□□□□ 0.47
Lrif1Q8CDD9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lrif1Q8CDD9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18■□□□□ 0.47
Lrif1Q8CDD9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lrif1Q8CDD9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lrif1Q8CDD9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lrif1Q8CDD9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lrif1Q8CDD9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Lrif1Q8CDD9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lrif1Q8CDD9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lrif1Q8CDD9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Lrif1Q8CDD9 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.99■□□□□ 0.47
Lrif1Q8CDD9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lrif1Q8CDD9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.99■□□□□ 0.47
Lrif1Q8CDD9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Lrif1Q8CDD9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.99■□□□□ 0.47
Lrif1Q8CDD9 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.99■□□□□ 0.47
Lrif1Q8CDD9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lrif1Q8CDD9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms