Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.42■□□□□ 0.7
Shroom1Q5SX79 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shroom1Q5SX79 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shroom1Q5SX79 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shroom1Q5SX79 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shroom1Q5SX79 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.41■□□□□ 0.7
Shroom1Q5SX79 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Shroom1Q5SX79 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shroom1Q5SX79 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Shroom1Q5SX79 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Shroom1Q5SX79 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shroom1Q5SX79 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Shroom1Q5SX79 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.41■□□□□ 0.7
Shroom1Q5SX79 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shroom1Q5SX79 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.41■□□□□ 0.7
Shroom1Q5SX79 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.41■□□□□ 0.7
Shroom1Q5SX79 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shroom1Q5SX79 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shroom1Q5SX79 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shroom1Q5SX79 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shroom1Q5SX79 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Shroom1Q5SX79 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shroom1Q5SX79 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Shroom1Q5SX79 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Shroom1Q5SX79 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shroom1Q5SX79 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shroom1Q5SX79 Mir6982-201ENSMUST00000184354 68 ntBASIC19.4■□□□□ 0.7
Shroom1Q5SX79 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Shroom1Q5SX79 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shroom1Q5SX79 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shroom1Q5SX79 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shroom1Q5SX79 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shroom1Q5SX79 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Shroom1Q5SX79 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.4■□□□□ 0.7
Shroom1Q5SX79 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shroom1Q5SX79 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Shroom1Q5SX79 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shroom1Q5SX79 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shroom1Q5SX79 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shroom1Q5SX79 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shroom1Q5SX79 Gm13158-201ENSMUST00000122007 736 ntBASIC19.39■□□□□ 0.69
Shroom1Q5SX79 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.39■□□□□ 0.69
Shroom1Q5SX79 Gm10698-201ENSMUST00000182663 604 ntBASIC19.39■□□□□ 0.69
Shroom1Q5SX79 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.39■□□□□ 0.69
Shroom1Q5SX79 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shroom1Q5SX79 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.39■□□□□ 0.69
Shroom1Q5SX79 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shroom1Q5SX79 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Shroom1Q5SX79 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shroom1Q5SX79 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Shroom1Q5SX79 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shroom1Q5SX79 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Shroom1Q5SX79 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shroom1Q5SX79 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Shroom1Q5SX79 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shroom1Q5SX79 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Shroom1Q5SX79 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shroom1Q5SX79 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shroom1Q5SX79 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shroom1Q5SX79 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shroom1Q5SX79 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shroom1Q5SX79 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.38■□□□□ 0.69
Shroom1Q5SX79 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.38■□□□□ 0.69
Shroom1Q5SX79 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Shroom1Q5SX79 Mir7071-201ENSMUST00000184847 69 ntBASIC19.38■□□□□ 0.69
Shroom1Q5SX79 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shroom1Q5SX79 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shroom1Q5SX79 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Shroom1Q5SX79 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shroom1Q5SX79 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shroom1Q5SX79 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Shroom1Q5SX79 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.37■□□□□ 0.69
Shroom1Q5SX79 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shroom1Q5SX79 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Shroom1Q5SX79 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.37■□□□□ 0.69
Shroom1Q5SX79 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shroom1Q5SX79 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shroom1Q5SX79 Gm15378-201ENSMUST00000121894 207 ntBASIC19.37■□□□□ 0.69
Shroom1Q5SX79 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Shroom1Q5SX79 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.37■□□□□ 0.69
Shroom1Q5SX79 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shroom1Q5SX79 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shroom1Q5SX79 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shroom1Q5SX79 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Shroom1Q5SX79 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shroom1Q5SX79 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shroom1Q5SX79 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shroom1Q5SX79 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shroom1Q5SX79 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shroom1Q5SX79 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.36■□□□□ 0.69
Shroom1Q5SX79 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shroom1Q5SX79 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Shroom1Q5SX79 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.36■□□□□ 0.69
Shroom1Q5SX79 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shroom1Q5SX79 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shroom1Q5SX79 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shroom1Q5SX79 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shroom1Q5SX79 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shroom1Q5SX79 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Shroom1Q5SX79 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 112.1 ms