Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
ABCA4P78363 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ABCA4P78363 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ABCA4P78363 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.97■□□□□ 0.47
ABCA4P78363 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ABCA4P78363 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
ABCA4P78363 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ABCA4P78363 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ABCA4P78363 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ABCA4P78363 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ABCA4P78363 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ABCA4P78363 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.96■□□□□ 0.47
ABCA4P78363 FAM210CP-201ENST00000445714 574 ntBASIC17.96■□□□□ 0.47
ABCA4P78363 UBE2SP1-201ENST00000450587 669 ntBASIC17.96■□□□□ 0.47
ABCA4P78363 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ABCA4P78363 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.96■□□□□ 0.47
ABCA4P78363 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.96■□□□□ 0.47
ABCA4P78363 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ABCA4P78363 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ABCA4P78363 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.96■□□□□ 0.47
ABCA4P78363 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ABCA4P78363 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.96■□□□□ 0.47
ABCA4P78363 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ABCA4P78363 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ABCA4P78363 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.96■□□□□ 0.47
ABCA4P78363 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.96■□□□□ 0.47
ABCA4P78363 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ABCA4P78363 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.95■□□□□ 0.46
ABCA4P78363 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.95■□□□□ 0.46
ABCA4P78363 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ABCA4P78363 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ABCA4P78363 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.95■□□□□ 0.46
ABCA4P78363 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.95■□□□□ 0.46
ABCA4P78363 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.95■□□□□ 0.46
ABCA4P78363 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
ABCA4P78363 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ABCA4P78363 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.95■□□□□ 0.46
ABCA4P78363 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ABCA4P78363 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ABCA4P78363 AC080038.3-201ENST00000623346 1952 ntBASIC17.95■□□□□ 0.46
ABCA4P78363 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ABCA4P78363 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ABCA4P78363 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ABCA4P78363 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ABCA4P78363 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.95■□□□□ 0.46
ABCA4P78363 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ABCA4P78363 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
ABCA4P78363 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ABCA4P78363 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ABCA4P78363 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.94■□□□□ 0.46
ABCA4P78363 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
ABCA4P78363 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.94■□□□□ 0.46
ABCA4P78363 AC008403.3-201ENST00000598924 454 ntBASIC17.94■□□□□ 0.46
ABCA4P78363 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ABCA4P78363 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ABCA4P78363 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ABCA4P78363 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.93■□□□□ 0.46
ABCA4P78363 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.93■□□□□ 0.46
ABCA4P78363 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.93■□□□□ 0.46
ABCA4P78363 AC245052.3-201ENST00000450182 901 ntBASIC17.93■□□□□ 0.46
ABCA4P78363 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.93■□□□□ 0.46
ABCA4P78363 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.93■□□□□ 0.46
ABCA4P78363 CYP2T3P-201ENST00000601990 817 ntBASIC17.93■□□□□ 0.46
ABCA4P78363 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.93■□□□□ 0.46
ABCA4P78363 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ABCA4P78363 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ABCA4P78363 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.93■□□□□ 0.46
ABCA4P78363 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.93■□□□□ 0.46
ABCA4P78363 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.93■□□□□ 0.46
ABCA4P78363 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
ABCA4P78363 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
ABCA4P78363 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.93■□□□□ 0.46
ABCA4P78363 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.93■□□□□ 0.46
ABCA4P78363 MIR4497-201ENST00000583208 89 ntBASIC17.93■□□□□ 0.46
ABCA4P78363 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
ABCA4P78363 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ABCA4P78363 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.92■□□□□ 0.46
ABCA4P78363 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ABCA4P78363 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ABCA4P78363 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ABCA4P78363 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.92■□□□□ 0.46
ABCA4P78363 LSM12P1-201ENST00000411836 588 ntBASIC17.92■□□□□ 0.46
ABCA4P78363 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ABCA4P78363 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.92■□□□□ 0.46
ABCA4P78363 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.92■□□□□ 0.46
ABCA4P78363 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ABCA4P78363 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.92■□□□□ 0.46
ABCA4P78363 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
ABCA4P78363 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ABCA4P78363 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.92■□□□□ 0.46
ABCA4P78363 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ABCA4P78363 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
ABCA4P78363 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.92■□□□□ 0.46
ABCA4P78363 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ABCA4P78363 AC012618.2-201ENST00000428058 849 ntBASIC17.92■□□□□ 0.46
ABCA4P78363 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ABCA4P78363 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ABCA4P78363 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.92■□□□□ 0.46
ABCA4P78363 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ABCA4P78363 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms