Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 YCR007CYCR007C 720 nt4.92□□□□□ -1.62
CAF120P53836 SPC19YDR201W 498 nt4.92□□□□□ -1.62
CAF120P53836 GOS1YHL031C 672 nt4.92□□□□□ -1.62
CAF120P53836 FRE1YLR214W 2061 nt4.92□□□□□ -1.62
CAF120P53836 HOM3YER052C 1584 nt4.91□□□□□ -1.62
CAF120P53836 SIF2YBR103W 1608 nt4.91□□□□□ -1.62
CAF120P53836 HSK3YKL138C-A 210 nt4.91□□□□□ -1.62
CAF120P53836 PIR1YKL164C 1026 nt4.91□□□□□ -1.62
CAF120P53836 YMR230W-AYMR230W-A 189 nt4.91□□□□□ -1.62
CAF120P53836 YMR326CYMR326C 309 nt4.91□□□□□ -1.62
CAF120P53836 PGA1YNL158W 597 nt4.91□□□□□ -1.62
CAF120P53836 NUT2YPR168W 474 nt4.91□□□□□ -1.62
CAF120P53836 NDC80YIL144W 2076 nt4.91□□□□□ -1.62
CAF120P53836 KEX1YGL203C 2190 nt4.91□□□□□ -1.62
CAF120P53836 YND1YER005W 1893 nt4.9□□□□□ -1.62
CAF120P53836 NNK1YKL171W 2787 nt4.9□□□□□ -1.62
CAF120P53836 AAD4YDL243C 990 nt4.9□□□□□ -1.63
CAF120P53836 ARC40YBR234C 1155 nt4.9□□□□□ -1.63
CAF120P53836 ADE4YMR300C 1533 nt4.9□□□□□ -1.63
CAF120P53836 PRP43YGL120C 2304 nt4.9□□□□□ -1.63
CAF120P53836 RRI2YOL117W 1938 nt4.89□□□□□ -1.63
CAF120P53836 SHS1YDL225W 1656 nt4.89□□□□□ -1.63
CAF120P53836 GPI8YDR331W 1236 nt4.89□□□□□ -1.63
CAF120P53836 YEL020C-BYEL020C-B 198 nt4.89□□□□□ -1.63
CAF120P53836 YIL012WYIL012W 342 nt4.89□□□□□ -1.63
CAF120P53836 MSL1YIR009W 336 nt4.89□□□□□ -1.63
CAF120P53836 NIT2YJL126W 924 nt4.89□□□□□ -1.63
CAF120P53836 YLR140WYLR140W 327 nt4.89□□□□□ -1.63
CAF120P53836 RPS10AYOR293W 318 nt4.89□□□□□ -1.63
CAF120P53836 SWC3YAL011W 1878 nt4.89□□□□□ -1.63
CAF120P53836 PRP28YDR243C 1767 nt4.88□□□□□ -1.63
CAF120P53836 MGS1YNL218W 1764 nt4.88□□□□□ -1.63
CAF120P53836 ATG21YPL100W 1491 nt4.88□□□□□ -1.63
CAF120P53836 BI4Q0120 1917 nt4.88□□□□□ -1.63
CAF120P53836 YDR544CYDR544C 429 nt4.88□□□□□ -1.63
CAF120P53836 INA22YIR024C 651 nt4.88□□□□□ -1.63
CAF120P53836 YAR070CYAR070C 300 nt4.88□□□□□ -1.63
CAF120P53836 YOR329W-AYOR329W-A 210 nt4.88□□□□□ -1.63
CAF120P53836 MRPL51YPR100W 423 nt4.88□□□□□ -1.63
CAF120P53836 REI1YBR267W 1182 nt4.88□□□□□ -1.63
CAF120P53836 MKT1YNL085W 2493 nt4.88□□□□□ -1.63
CAF120P53836 GAL4YPL248C 2646 nt4.88□□□□□ -1.63
CAF120P53836 VIK1YPL253C 1944 nt4.87□□□□□ -1.63
CAF120P53836 DOA1YKL213C 2148 nt4.87□□□□□ -1.63
CAF120P53836 YEL067CYEL067C 588 nt4.87□□□□□ -1.63
CAF120P53836 YGL165CYGL165C 579 nt4.87□□□□□ -1.63
CAF120P53836 YAL044W-AYAL044W-A 333 nt4.87□□□□□ -1.63
CAF120P53836 YAL059C-AYAL059C-A 423 nt4.87□□□□□ -1.63
CAF120P53836 TDA5YLR426W 981 nt4.87□□□□□ -1.63
CAF120P53836 YMR141W-AYMR141W-A 225 nt4.87□□□□□ -1.63
CAF120P53836 snR10snR10 245 nt4.87□□□□□ -1.63
CAF120P53836 RPC40YPR110C 1008 nt4.87□□□□□ -1.63
CAF120P53836 DNF2YDR093W 4839 nt4.86□□□□□ -1.63
CAF120P53836 MSC7YHR039C 1935 nt4.86□□□□□ -1.63
CAF120P53836 MVP1YMR004W 1536 nt4.86□□□□□ -1.63
CAF120P53836 DIE2YGR227W 1578 nt4.86□□□□□ -1.63
CAF120P53836 OAF1YAL051W 3144 nt4.86□□□□□ -1.63
CAF120P53836 SAC1YKL212W 1872 nt4.86□□□□□ -1.63
CAF120P53836 SBE2YDR351W 2595 nt4.85□□□□□ -1.63
CAF120P53836 YOS1YER074W-A 258 nt4.85□□□□□ -1.63
CAF120P53836 SLX8YER116C 825 nt4.85□□□□□ -1.63
CAF120P53836 TDA8YAL064C-A 381 nt4.85□□□□□ -1.63
CAF120P53836 YLR154W-EYLR154W-E 204 nt4.85□□□□□ -1.63
CAF120P53836 TSC3YBR058C-A 243 nt4.85□□□□□ -1.63
CAF120P53836 SHG1YBR258C 429 nt4.85□□□□□ -1.63
CAF120P53836 RVB1YDR190C 1392 nt4.85□□□□□ -1.63
CAF120P53836 PDI1YCL043C 1569 nt4.85□□□□□ -1.63
CAF120P53836 COX1Q0045 1605 nt4.85□□□□□ -1.63
CAF120P53836 YLR152CYLR152C 1731 nt4.85□□□□□ -1.63
CAF120P53836 FUI1YBL042C 1920 nt4.85□□□□□ -1.63
CAF120P53836 SPP382YLR424W 2127 nt4.85□□□□□ -1.63
CAF120P53836 BOI2YER114C 3123 nt4.85□□□□□ -1.63
CAF120P53836 DAL81YIR023W 2913 nt4.84□□□□□ -1.63
CAF120P53836 SKN7YHR206W 1869 nt4.84□□□□□ -1.63
CAF120P53836 TPO5YKL174C 1857 nt4.84□□□□□ -1.63
CAF120P53836 VAC8YEL013W 1737 nt4.84□□□□□ -1.63
CAF120P53836 HXT14YNL318C 1623 nt4.84□□□□□ -1.63
CAF120P53836 STP1YDR463W 1560 nt4.84□□□□□ -1.63
CAF120P53836 OSW7YFR039C 1533 nt4.84□□□□□ -1.63
CAF120P53836 OTU1YFL044C 906 nt4.84□□□□□ -1.63
CAF120P53836 RPL30YGL030W 318 nt4.84□□□□□ -1.63
CAF120P53836 ALG13YGL047W 609 nt4.84□□□□□ -1.63
CAF120P53836 YGR269WYGR269W 327 nt4.84□□□□□ -1.63
CAF120P53836 SAE3YHR079C-A 276 nt4.84□□□□□ -1.63
CAF120P53836 NNF1YJR112W 606 nt4.84□□□□□ -1.63
CAF120P53836 YPL229WYPL229W 621 nt4.84□□□□□ -1.63
CAF120P53836 YBR242WYBR242W 717 nt4.84□□□□□ -1.63
CAF120P53836 ORC2YBR060C 1863 nt4.83□□□□□ -1.64
CAF120P53836 TPO2YGR138C 1845 nt4.83□□□□□ -1.64
CAF120P53836 IMD2YHR216W 1572 nt4.83□□□□□ -1.64
CAF120P53836 RSC6YCR052W 1452 nt4.83□□□□□ -1.64
CAF120P53836 TIF35YDR429C 825 nt4.83□□□□□ -1.64
CAF120P53836 YEL075CYEL075C 369 nt4.83□□□□□ -1.64
CAF120P53836 HMF1YER057C 390 nt4.83□□□□□ -1.64
CAF120P53836 YER189WYER189W 369 nt4.83□□□□□ -1.64
CAF120P53836 YGL052WYGL052W 306 nt4.83□□□□□ -1.64
CAF120P53836 RPL28YGL103W 450 nt4.83□□□□□ -1.64
CAF120P53836 NOP19YGR251W 591 nt4.83□□□□□ -1.64
CAF120P53836 YAE1YJR067C 426 nt4.83□□□□□ -1.64
CAF120P53836 PAM18YLR008C 507 nt4.83□□□□□ -1.64
Retrieved 100 of 7,029 protein–RNA pairs in 63.5 ms