Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 HFM1YGL251C 3564 nt3.61□□□□□ -1.83
SSM4P40318 ERT1YBR239C 1590 nt3.61□□□□□ -1.83
SSM4P40318 MSB1YOR188W 3414 nt3.6□□□□□ -1.83
SSM4P40318 SRC1YML034W 2505 nt3.6□□□□□ -1.83
SSM4P40318 SYO1YDL063C 1863 nt3.6□□□□□ -1.83
SSM4P40318 NSE4YDL105W 1209 nt3.6□□□□□ -1.83
SSM4P40318 SLU7YDR088C 1149 nt3.6□□□□□ -1.83
SSM4P40318 YHR212CYHR212C 336 nt3.6□□□□□ -1.83
SSM4P40318 YAR060CYAR060C 336 nt3.6□□□□□ -1.83
SSM4P40318 YOR055WYOR055W 435 nt3.6□□□□□ -1.83
SSM4P40318 GCY1YOR120W 939 nt3.6□□□□□ -1.83
SSM4P40318 SRL4YPL033C 846 nt3.6□□□□□ -1.83
SSM4P40318 RRP15YPR143W 753 nt3.6□□□□□ -1.83
SSM4P40318 NAB6YML117W 3405 nt3.59□□□□□ -1.83
SSM4P40318 RPO41YFL036W 4056 nt3.59□□□□□ -1.83
SSM4P40318 PHO91YNR013C 2685 nt3.59□□□□□ -1.83
SSM4P40318 AGE1YDR524C 1449 nt3.59□□□□□ -1.83
SSM4P40318 APC11YDL008W 498 nt3.59□□□□□ -1.83
SSM4P40318 snR70snR70 164 nt3.59□□□□□ -1.83
SSM4P40318 MGT1YDL200C 567 nt3.59□□□□□ -1.83
SSM4P40318 RAV2YDR202C 1056 nt3.59□□□□□ -1.83
SSM4P40318 YGL039WYGL039W 1047 nt3.59□□□□□ -1.83
SSM4P40318 Q0144Q0144 330 nt3.59□□□□□ -1.83
SSM4P40318 LIN1YHR156C 1023 nt3.59□□□□□ -1.83
SSM4P40318 RCN1YKL159C 636 nt3.59□□□□□ -1.83
SSM4P40318 YLR257WYLR257W 966 nt3.59□□□□□ -1.83
SSM4P40318 GIM5YML094W 492 nt3.59□□□□□ -1.83
SSM4P40318 SEC15YGL233W 2733 nt3.59□□□□□ -1.83
SSM4P40318 POL2YNL262W 6669 nt3.59□□□□□ -1.84
SSM4P40318 PEX5YDR244W 1839 nt3.58□□□□□ -1.84
SSM4P40318 YDR042CYDR042C 603 nt3.58□□□□□ -1.84
SSM4P40318 FMN1YDR236C 657 nt3.58□□□□□ -1.84
SSM4P40318 YGR126WYGR126W 693 nt3.58□□□□□ -1.84
SSM4P40318 VMA10YHR039C-A 345 nt3.58□□□□□ -1.84
SSM4P40318 TPK3YKL166C 1197 nt3.58□□□□□ -1.84
SSM4P40318 TMA10YLR327C 261 nt3.58□□□□□ -1.84
SSM4P40318 YLR001CYLR001C 2589 nt3.58□□□□□ -1.84
SSM4P40318 ESC2YDR363W 1371 nt3.58□□□□□ -1.84
SSM4P40318 NDC80YIL144W 2076 nt3.58□□□□□ -1.84
SSM4P40318 RED1YLR263W 2484 nt3.57□□□□□ -1.84
SSM4P40318 SNQ2YDR011W 4506 nt3.57□□□□□ -1.84
SSM4P40318 SGS1YMR190C 4344 nt3.57□□□□□ -1.84
SSM4P40318 YDL050CYDL050C 372 nt3.57□□□□□ -1.84
SSM4P40318 LOC1YFR001W 615 nt3.57□□□□□ -1.84
SSM4P40318 YKL069WYKL069W 543 nt3.57□□□□□ -1.84
SSM4P40318 YOR152CYOR152C 771 nt3.57□□□□□ -1.84
SSM4P40318 ARL3YPL051W 597 nt3.57□□□□□ -1.84
SSM4P40318 AVT5YBL089W 1380 nt3.57□□□□□ -1.84
SSM4P40318 21S_rRNA21S_rRNA 3296 nt3.57□□□□□ -1.84
SSM4P40318 REG1YDR028C 3045 nt3.57□□□□□ -1.84
SSM4P40318 KRE2YDR483W 1329 nt3.56□□□□□ -1.84
SSM4P40318 FUS2YMR232W 2034 nt3.56□□□□□ -1.84
SSM4P40318 GET1YGL020C 708 nt3.56□□□□□ -1.84
SSM4P40318 PGD1YGL025C 1194 nt3.56□□□□□ -1.84
SSM4P40318 PRM6YML047C 1059 nt3.56□□□□□ -1.84
SSM4P40318 PDR17YNL264C 1053 nt3.56□□□□□ -1.84
SSM4P40318 BUD21YOR078W 645 nt3.56□□□□□ -1.84
SSM4P40318 MUB1YMR100W 1863 nt3.56□□□□□ -1.84
SSM4P40318 MPS1YDL028C 2295 nt3.55□□□□□ -1.84
SSM4P40318 VAC14YLR386W 2643 nt3.55□□□□□ -1.84
SSM4P40318 YAK1YJL141C 2424 nt3.55□□□□□ -1.84
SSM4P40318 HMO1YDR174W 741 nt3.55□□□□□ -1.84
SSM4P40318 RTT105YER104W 627 nt3.55□□□□□ -1.84
SSM4P40318 YGR160WYGR160W 612 nt3.55□□□□□ -1.84
SSM4P40318 AIM18YHR198C 966 nt3.55□□□□□ -1.84
SSM4P40318 YIL141WYIL141W 390 nt3.55□□□□□ -1.84
SSM4P40318 YJL133C-AYJL133C-A 225 nt3.55□□□□□ -1.84
SSM4P40318 PDS5YMR076C 3834 nt3.55□□□□□ -1.84
SSM4P40318 ATP11YNL315C 957 nt3.55□□□□□ -1.84
SSM4P40318 YBL108WYBL108W 306 nt3.55□□□□□ -1.84
SSM4P40318 YCL002CYCL002C 792 nt3.55□□□□□ -1.84
SSM4P40318 FLO1YAR050W 4614 nt3.55□□□□□ -1.84
SSM4P40318 MUS81YDR386W 1899 nt3.55□□□□□ -1.84
SSM4P40318 DBP7YKR024C 2229 nt3.55□□□□□ -1.84
SSM4P40318 SRD1YCR018C 666 nt3.54□□□□□ -1.84
SSM4P40318 PEX10YDR265W 1014 nt3.54□□□□□ -1.84
SSM4P40318 YKL070WYKL070W 510 nt3.54□□□□□ -1.84
SSM4P40318 YBL065WYBL065W 345 nt3.54□□□□□ -1.84
SSM4P40318 PFY1YOR122C 381 nt3.54□□□□□ -1.84
SSM4P40318 RSM28YDR494W 1086 nt3.53□□□□□ -1.84
SSM4P40318 YER046W-AYER046W-A 330 nt3.53□□□□□ -1.84
SSM4P40318 YGR053CYGR053C 852 nt3.53□□□□□ -1.84
SSM4P40318 YIL046W-AYIL046W-A 165 nt3.53□□□□□ -1.84
SSM4P40318 YKE2YLR200W 345 nt3.53□□□□□ -1.84
SSM4P40318 MPD2YOL088C 834 nt3.53□□□□□ -1.84
SSM4P40318 YPL119C-AYPL119C-A 264 nt3.53□□□□□ -1.84
SSM4P40318 RPC40YPR110C 1008 nt3.53□□□□□ -1.84
SSM4P40318 KAP95YLR347C 2586 nt3.53□□□□□ -1.84
SSM4P40318 SMC2YFR031C 3513 nt3.53□□□□□ -1.84
SSM4P40318 NUR1YDL089W 1455 nt3.53□□□□□ -1.84
SSM4P40318 SIN3YOL004W 4611 nt3.52□□□□□ -1.85
SSM4P40318 YDR248CYDR248C 582 nt3.52□□□□□ -1.85
SSM4P40318 CPR5YDR304C 678 nt3.52□□□□□ -1.85
SSM4P40318 AAD16YFL057C 459 nt3.52□□□□□ -1.85
SSM4P40318 PAU14YIL176C 363 nt3.52□□□□□ -1.85
SSM4P40318 PAU1YJL223C 363 nt3.52□□□□□ -1.85
SSM4P40318 PSY1YKL076C 384 nt3.52□□□□□ -1.85
SSM4P40318 YKR011CYKR011C 1062 nt3.52□□□□□ -1.85
SSM4P40318 YNR025CYNR025C 360 nt3.52□□□□□ -1.85
SSM4P40318 SGT1YOR057W 1188 nt3.52□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 174.4 ms