Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
4933424G06RikA0A140LIP3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
4933424G06RikA0A140LIP3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
4933424G06RikA0A140LIP3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
4933424G06RikA0A140LIP3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
4933424G06RikA0A140LIP3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
4933424G06RikA0A140LIP3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
4933424G06RikA0A140LIP3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
4933424G06RikA0A140LIP3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
4933424G06RikA0A140LIP3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
4933424G06RikA0A140LIP3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.64■□□□□ 0.57
4933424G06RikA0A140LIP3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
4933424G06RikA0A140LIP3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
4933424G06RikA0A140LIP3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
4933424G06RikA0A140LIP3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
4933424G06RikA0A140LIP3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
4933424G06RikA0A140LIP3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
4933424G06RikA0A140LIP3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
4933424G06RikA0A140LIP3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
4933424G06RikA0A140LIP3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 Gm11927-201ENSMUST00000118472 759 ntBASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
4933424G06RikA0A140LIP3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
4933424G06RikA0A140LIP3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
4933424G06RikA0A140LIP3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
4933424G06RikA0A140LIP3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
4933424G06RikA0A140LIP3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.62■□□□□ 0.57
4933424G06RikA0A140LIP3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
4933424G06RikA0A140LIP3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
4933424G06RikA0A140LIP3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
4933424G06RikA0A140LIP3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
4933424G06RikA0A140LIP3 Gm6576-201ENSMUST00000169678 883 ntBASIC18.62■□□□□ 0.57
4933424G06RikA0A140LIP3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
4933424G06RikA0A140LIP3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.62■□□□□ 0.57
4933424G06RikA0A140LIP3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
4933424G06RikA0A140LIP3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
4933424G06RikA0A140LIP3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
4933424G06RikA0A140LIP3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.62■□□□□ 0.57
4933424G06RikA0A140LIP3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
4933424G06RikA0A140LIP3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
4933424G06RikA0A140LIP3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
4933424G06RikA0A140LIP3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
4933424G06RikA0A140LIP3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.62■□□□□ 0.57
4933424G06RikA0A140LIP3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.61■□□□□ 0.57
4933424G06RikA0A140LIP3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
4933424G06RikA0A140LIP3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
4933424G06RikA0A140LIP3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
4933424G06RikA0A140LIP3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
4933424G06RikA0A140LIP3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
4933424G06RikA0A140LIP3 Gm15378-201ENSMUST00000121894 207 ntBASIC18.61■□□□□ 0.57
4933424G06RikA0A140LIP3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.61■□□□□ 0.57
4933424G06RikA0A140LIP3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.61■□□□□ 0.57
4933424G06RikA0A140LIP3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.61■□□□□ 0.57
4933424G06RikA0A140LIP3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.61■□□□□ 0.57
4933424G06RikA0A140LIP3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.61■□□□□ 0.57
4933424G06RikA0A140LIP3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.61■□□□□ 0.57
4933424G06RikA0A140LIP3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
4933424G06RikA0A140LIP3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
4933424G06RikA0A140LIP3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
4933424G06RikA0A140LIP3 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.61■□□□□ 0.57
4933424G06RikA0A140LIP3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
4933424G06RikA0A140LIP3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
4933424G06RikA0A140LIP3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
4933424G06RikA0A140LIP3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
4933424G06RikA0A140LIP3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
4933424G06RikA0A140LIP3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
4933424G06RikA0A140LIP3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
4933424G06RikA0A140LIP3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
4933424G06RikA0A140LIP3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
4933424G06RikA0A140LIP3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
4933424G06RikA0A140LIP3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
4933424G06RikA0A140LIP3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
4933424G06RikA0A140LIP3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
4933424G06RikA0A140LIP3 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.6■□□□□ 0.57
4933424G06RikA0A140LIP3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
4933424G06RikA0A140LIP3 Gm10698-201ENSMUST00000182663 604 ntBASIC18.6■□□□□ 0.57
4933424G06RikA0A140LIP3 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.6■□□□□ 0.57
4933424G06RikA0A140LIP3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
4933424G06RikA0A140LIP3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
4933424G06RikA0A140LIP3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 174 ms