Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.67■■□□□ 1.06
HAPLN3Q96S86 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HAPLN3Q96S86 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HAPLN3Q96S86 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.67■■□□□ 1.06
HAPLN3Q96S86 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HAPLN3Q96S86 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.67■■□□□ 1.06
HAPLN3Q96S86 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HAPLN3Q96S86 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HAPLN3Q96S86 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HAPLN3Q96S86 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HAPLN3Q96S86 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.66■■□□□ 1.06
HAPLN3Q96S86 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HAPLN3Q96S86 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
HAPLN3Q96S86 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HAPLN3Q96S86 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.66■■□□□ 1.06
HAPLN3Q96S86 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
HAPLN3Q96S86 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.66■■□□□ 1.06
HAPLN3Q96S86 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
HAPLN3Q96S86 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.66■■□□□ 1.06
HAPLN3Q96S86 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.66■■□□□ 1.06
HAPLN3Q96S86 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.66■■□□□ 1.06
HAPLN3Q96S86 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.66■■□□□ 1.06
HAPLN3Q96S86 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.66■■□□□ 1.06
HAPLN3Q96S86 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
HAPLN3Q96S86 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HAPLN3Q96S86 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.65■■□□□ 1.06
HAPLN3Q96S86 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HAPLN3Q96S86 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HAPLN3Q96S86 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HAPLN3Q96S86 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HAPLN3Q96S86 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.65■■□□□ 1.06
HAPLN3Q96S86 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.65■■□□□ 1.06
HAPLN3Q96S86 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
HAPLN3Q96S86 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
HAPLN3Q96S86 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HAPLN3Q96S86 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.65■■□□□ 1.06
HAPLN3Q96S86 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.65■■□□□ 1.06
HAPLN3Q96S86 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HAPLN3Q96S86 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.65■■□□□ 1.06
HAPLN3Q96S86 AC092437.1-201ENST00000624794 1048 ntBASIC21.65■■□□□ 1.06
HAPLN3Q96S86 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HAPLN3Q96S86 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HAPLN3Q96S86 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.65■■□□□ 1.06
HAPLN3Q96S86 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HAPLN3Q96S86 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
HAPLN3Q96S86 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
HAPLN3Q96S86 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.64■■□□□ 1.06
HAPLN3Q96S86 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
HAPLN3Q96S86 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
HAPLN3Q96S86 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
HAPLN3Q96S86 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
HAPLN3Q96S86 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.64■■□□□ 1.05
HAPLN3Q96S86 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HAPLN3Q96S86 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
HAPLN3Q96S86 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HAPLN3Q96S86 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.64■■□□□ 1.05
HAPLN3Q96S86 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.64■■□□□ 1.05
HAPLN3Q96S86 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HAPLN3Q96S86 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
HAPLN3Q96S86 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
HAPLN3Q96S86 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HAPLN3Q96S86 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.63■■□□□ 1.05
HAPLN3Q96S86 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HAPLN3Q96S86 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
HAPLN3Q96S86 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HAPLN3Q96S86 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.63■■□□□ 1.05
HAPLN3Q96S86 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
HAPLN3Q96S86 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.63■■□□□ 1.05
HAPLN3Q96S86 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.63■■□□□ 1.05
HAPLN3Q96S86 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HAPLN3Q96S86 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HAPLN3Q96S86 IKBKGP1-201ENST00000612193 1073 ntBASIC21.63■■□□□ 1.05
HAPLN3Q96S86 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.63■■□□□ 1.05
HAPLN3Q96S86 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
HAPLN3Q96S86 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
HAPLN3Q96S86 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.63■■□□□ 1.05
HAPLN3Q96S86 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HAPLN3Q96S86 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HAPLN3Q96S86 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.63■■□□□ 1.05
HAPLN3Q96S86 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HAPLN3Q96S86 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HAPLN3Q96S86 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.62■■□□□ 1.05
HAPLN3Q96S86 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
HAPLN3Q96S86 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
HAPLN3Q96S86 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.62■■□□□ 1.05
HAPLN3Q96S86 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.62■■□□□ 1.05
HAPLN3Q96S86 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.62■■□□□ 1.05
HAPLN3Q96S86 AC026310.3-201ENST00000625186 2373 ntBASIC21.62■■□□□ 1.05
HAPLN3Q96S86 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.62■■□□□ 1.05
HAPLN3Q96S86 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HAPLN3Q96S86 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HAPLN3Q96S86 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HAPLN3Q96S86 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
HAPLN3Q96S86 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HAPLN3Q96S86 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HAPLN3Q96S86 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
HAPLN3Q96S86 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.61■■□□□ 1.05
HAPLN3Q96S86 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.61■■□□□ 1.05
HAPLN3Q96S86 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
HAPLN3Q96S86 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms