Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM43Q96BQ3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM43Q96BQ3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
TRIM43Q96BQ3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.93■■□□□ 1.26
TRIM43Q96BQ3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.93■■□□□ 1.26
TRIM43Q96BQ3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRIM43Q96BQ3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TRIM43Q96BQ3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.93■■□□□ 1.26
TRIM43Q96BQ3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC22.93■■□□□ 1.26
TRIM43Q96BQ3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
TRIM43Q96BQ3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
TRIM43Q96BQ3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.93■■□□□ 1.26
TRIM43Q96BQ3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRIM43Q96BQ3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.93■■□□□ 1.26
TRIM43Q96BQ3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRIM43Q96BQ3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
TRIM43Q96BQ3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM43Q96BQ3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM43Q96BQ3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM43Q96BQ3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM43Q96BQ3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM43Q96BQ3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
TRIM43Q96BQ3 RCN1P1-201ENST00000400413 996 ntBASIC22.92■■□□□ 1.26
TRIM43Q96BQ3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.92■■□□□ 1.26
TRIM43Q96BQ3 AC087499.1-201ENST00000418141 1075 ntBASIC22.92■■□□□ 1.26
TRIM43Q96BQ3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
TRIM43Q96BQ3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.92■■□□□ 1.26
TRIM43Q96BQ3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.92■■□□□ 1.26
TRIM43Q96BQ3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM43Q96BQ3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM43Q96BQ3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM43Q96BQ3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM43Q96BQ3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.91■■□□□ 1.26
TRIM43Q96BQ3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM43Q96BQ3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM43Q96BQ3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM43Q96BQ3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC22.91■■□□□ 1.26
TRIM43Q96BQ3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC22.91■■□□□ 1.26
TRIM43Q96BQ3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM43Q96BQ3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.91■■□□□ 1.26
TRIM43Q96BQ3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM43Q96BQ3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.91■■□□□ 1.26
TRIM43Q96BQ3 TK2-213ENST00000563369 882 ntTSL 5 BASIC22.91■■□□□ 1.26
TRIM43Q96BQ3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.91■■□□□ 1.26
TRIM43Q96BQ3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM43Q96BQ3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM43Q96BQ3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM43Q96BQ3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM43Q96BQ3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.9■■□□□ 1.26
TRIM43Q96BQ3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM43Q96BQ3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.9■■□□□ 1.26
TRIM43Q96BQ3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM43Q96BQ3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM43Q96BQ3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM43Q96BQ3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM43Q96BQ3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM43Q96BQ3 AL049637.2-201ENST00000641778 930 ntBASIC22.9■■□□□ 1.26
TRIM43Q96BQ3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM43Q96BQ3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.9■■□□□ 1.26
TRIM43Q96BQ3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TRIM43Q96BQ3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
TRIM43Q96BQ3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TRIM43Q96BQ3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TRIM43Q96BQ3 AC003102.1-202ENST00000563394 1796 ntBASIC22.89■■□□□ 1.26
TRIM43Q96BQ3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.89■■□□□ 1.26
TRIM43Q96BQ3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
TRIM43Q96BQ3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TRIM43Q96BQ3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.89■■□□□ 1.25
TRIM43Q96BQ3 AC245052.3-201ENST00000450182 901 ntBASIC22.89■■□□□ 1.25
TRIM43Q96BQ3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.89■■□□□ 1.25
TRIM43Q96BQ3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
TRIM43Q96BQ3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
TRIM43Q96BQ3 AC012306.2-201ENST00000609350 630 ntBASIC22.89■■□□□ 1.25
TRIM43Q96BQ3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TRIM43Q96BQ3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TRIM43Q96BQ3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.89■■□□□ 1.25
TRIM43Q96BQ3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
TRIM43Q96BQ3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.89■■□□□ 1.25
TRIM43Q96BQ3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.89■■□□□ 1.25
TRIM43Q96BQ3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.88■■□□□ 1.25
TRIM43Q96BQ3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.88■■□□□ 1.25
TRIM43Q96BQ3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM43Q96BQ3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.88■■□□□ 1.25
TRIM43Q96BQ3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
TRIM43Q96BQ3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC22.88■■□□□ 1.25
TRIM43Q96BQ3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC22.88■■□□□ 1.25
TRIM43Q96BQ3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.88■■□□□ 1.25
TRIM43Q96BQ3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.88■■□□□ 1.25
TRIM43Q96BQ3 MTDHP1-201ENST00000605323 784 ntBASIC22.88■■□□□ 1.25
TRIM43Q96BQ3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
TRIM43Q96BQ3 AC097493.4-201ENST00000641197 219 ntBASIC22.88■■□□□ 1.25
TRIM43Q96BQ3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM43Q96BQ3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM43Q96BQ3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.88■■□□□ 1.25
TRIM43Q96BQ3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.88■■□□□ 1.25
TRIM43Q96BQ3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
TRIM43Q96BQ3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM43Q96BQ3 AC087742.1-201ENST00000575880 1738 ntBASIC22.88■■□□□ 1.25
TRIM43Q96BQ3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.88■■□□□ 1.25
TRIM43Q96BQ3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms