Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.91■□□□□ 0.78
Upb1Q8VC97 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Upb1Q8VC97 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Upb1Q8VC97 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Upb1Q8VC97 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Upb1Q8VC97 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Upb1Q8VC97 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Upb1Q8VC97 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.9■□□□□ 0.78
Upb1Q8VC97 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Upb1Q8VC97 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.9■□□□□ 0.78
Upb1Q8VC97 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.9■□□□□ 0.78
Upb1Q8VC97 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Upb1Q8VC97 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Upb1Q8VC97 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
Upb1Q8VC97 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Upb1Q8VC97 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Upb1Q8VC97 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Upb1Q8VC97 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Upb1Q8VC97 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Upb1Q8VC97 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Upb1Q8VC97 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Upb1Q8VC97 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Upb1Q8VC97 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Upb1Q8VC97 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Upb1Q8VC97 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Upb1Q8VC97 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Upb1Q8VC97 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upb1Q8VC97 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upb1Q8VC97 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upb1Q8VC97 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upb1Q8VC97 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upb1Q8VC97 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.88■□□□□ 0.77
Upb1Q8VC97 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Upb1Q8VC97 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Upb1Q8VC97 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Upb1Q8VC97 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Upb1Q8VC97 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.87■□□□□ 0.77
Upb1Q8VC97 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Upb1Q8VC97 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.87■□□□□ 0.77
Upb1Q8VC97 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.87■□□□□ 0.77
Upb1Q8VC97 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upb1Q8VC97 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.87■□□□□ 0.77
Upb1Q8VC97 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upb1Q8VC97 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upb1Q8VC97 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.87■□□□□ 0.77
Upb1Q8VC97 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upb1Q8VC97 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
Upb1Q8VC97 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upb1Q8VC97 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upb1Q8VC97 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upb1Q8VC97 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upb1Q8VC97 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.86■□□□□ 0.77
Upb1Q8VC97 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upb1Q8VC97 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Upb1Q8VC97 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.86■□□□□ 0.77
Upb1Q8VC97 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upb1Q8VC97 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upb1Q8VC97 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upb1Q8VC97 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upb1Q8VC97 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upb1Q8VC97 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Upb1Q8VC97 Gm38285-201ENSMUST00000192928 922 ntBASIC19.85■□□□□ 0.77
Upb1Q8VC97 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.85■□□□□ 0.77
Upb1Q8VC97 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.85■□□□□ 0.77
Upb1Q8VC97 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upb1Q8VC97 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upb1Q8VC97 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upb1Q8VC97 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upb1Q8VC97 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upb1Q8VC97 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upb1Q8VC97 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upb1Q8VC97 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upb1Q8VC97 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upb1Q8VC97 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upb1Q8VC97 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Upb1Q8VC97 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Upb1Q8VC97 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Upb1Q8VC97 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.84■□□□□ 0.77
Upb1Q8VC97 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upb1Q8VC97 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Upb1Q8VC97 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upb1Q8VC97 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.84■□□□□ 0.77
Upb1Q8VC97 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upb1Q8VC97 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Upb1Q8VC97 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upb1Q8VC97 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upb1Q8VC97 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upb1Q8VC97 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Upb1Q8VC97 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.83■□□□□ 0.77
Upb1Q8VC97 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Upb1Q8VC97 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.83■□□□□ 0.77
Upb1Q8VC97 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.83■□□□□ 0.77
Upb1Q8VC97 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upb1Q8VC97 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upb1Q8VC97 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Upb1Q8VC97 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Upb1Q8VC97 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Upb1Q8VC97 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Upb1Q8VC97 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upb1Q8VC97 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 280.4 ms