Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.1■□□□□ 0.49
Lrif1Q8CDD9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lrif1Q8CDD9 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.1■□□□□ 0.49
Lrif1Q8CDD9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Lrif1Q8CDD9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.1■□□□□ 0.49
Lrif1Q8CDD9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lrif1Q8CDD9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lrif1Q8CDD9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lrif1Q8CDD9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lrif1Q8CDD9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lrif1Q8CDD9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lrif1Q8CDD9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lrif1Q8CDD9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lrif1Q8CDD9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Lrif1Q8CDD9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lrif1Q8CDD9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lrif1Q8CDD9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lrif1Q8CDD9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lrif1Q8CDD9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lrif1Q8CDD9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lrif1Q8CDD9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.09■□□□□ 0.49
Lrif1Q8CDD9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lrif1Q8CDD9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lrif1Q8CDD9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.09■□□□□ 0.49
Lrif1Q8CDD9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Lrif1Q8CDD9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Lrif1Q8CDD9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lrif1Q8CDD9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.09■□□□□ 0.49
Lrif1Q8CDD9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lrif1Q8CDD9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lrif1Q8CDD9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Lrif1Q8CDD9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lrif1Q8CDD9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lrif1Q8CDD9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lrif1Q8CDD9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Lrif1Q8CDD9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.08■□□□□ 0.48
Lrif1Q8CDD9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Lrif1Q8CDD9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lrif1Q8CDD9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lrif1Q8CDD9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Lrif1Q8CDD9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lrif1Q8CDD9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.08■□□□□ 0.48
Lrif1Q8CDD9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Lrif1Q8CDD9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lrif1Q8CDD9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Lrif1Q8CDD9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Lrif1Q8CDD9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrif1Q8CDD9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrif1Q8CDD9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrif1Q8CDD9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrif1Q8CDD9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrif1Q8CDD9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.07■□□□□ 0.48
Lrif1Q8CDD9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrif1Q8CDD9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrif1Q8CDD9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Lrif1Q8CDD9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrif1Q8CDD9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lrif1Q8CDD9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lrif1Q8CDD9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrif1Q8CDD9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Lrif1Q8CDD9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrif1Q8CDD9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lrif1Q8CDD9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrif1Q8CDD9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Lrif1Q8CDD9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.06■□□□□ 0.48
Lrif1Q8CDD9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.06■□□□□ 0.48
Lrif1Q8CDD9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lrif1Q8CDD9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.06■□□□□ 0.48
Lrif1Q8CDD9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrif1Q8CDD9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrif1Q8CDD9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Lrif1Q8CDD9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrif1Q8CDD9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrif1Q8CDD9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Lrif1Q8CDD9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrif1Q8CDD9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.06■□□□□ 0.48
Lrif1Q8CDD9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lrif1Q8CDD9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrif1Q8CDD9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrif1Q8CDD9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.06■□□□□ 0.48
Lrif1Q8CDD9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrif1Q8CDD9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrif1Q8CDD9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.05■□□□□ 0.48
Lrif1Q8CDD9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Lrif1Q8CDD9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrif1Q8CDD9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrif1Q8CDD9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrif1Q8CDD9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrif1Q8CDD9 Gm5874-201ENSMUST00000096101 508 ntBASIC18.05■□□□□ 0.48
Lrif1Q8CDD9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrif1Q8CDD9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrif1Q8CDD9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrif1Q8CDD9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrif1Q8CDD9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrif1Q8CDD9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lrif1Q8CDD9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrif1Q8CDD9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lrif1Q8CDD9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrif1Q8CDD9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.04■□□□□ 0.48
Lrif1Q8CDD9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms