Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Alx1Q8C8B0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Alx1Q8C8B0 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.5■■□□□ 1.03
Alx1Q8C8B0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.5■■□□□ 1.03
Alx1Q8C8B0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Alx1Q8C8B0 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.49■■□□□ 1.03
Alx1Q8C8B0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Alx1Q8C8B0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Alx1Q8C8B0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Alx1Q8C8B0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Alx1Q8C8B0 Gm10653-202ENSMUST00000139570 835 ntBASIC21.49■■□□□ 1.03
Alx1Q8C8B0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Alx1Q8C8B0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Alx1Q8C8B0 Gm38285-201ENSMUST00000192928 922 ntBASIC21.49■■□□□ 1.03
Alx1Q8C8B0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Alx1Q8C8B0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Alx1Q8C8B0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Alx1Q8C8B0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Alx1Q8C8B0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Alx1Q8C8B0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Alx1Q8C8B0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.48■■□□□ 1.03
Alx1Q8C8B0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Alx1Q8C8B0 Gm11249-201ENSMUST00000117071 859 ntBASIC21.48■■□□□ 1.03
Alx1Q8C8B0 Gm11927-201ENSMUST00000118472 759 ntBASIC21.48■■□□□ 1.03
Alx1Q8C8B0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Alx1Q8C8B0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Alx1Q8C8B0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Alx1Q8C8B0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Alx1Q8C8B0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Alx1Q8C8B0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Alx1Q8C8B0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Alx1Q8C8B0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Alx1Q8C8B0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Alx1Q8C8B0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Alx1Q8C8B0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Alx1Q8C8B0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Alx1Q8C8B0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Alx1Q8C8B0 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.46■■□□□ 1.03
Alx1Q8C8B0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Alx1Q8C8B0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Alx1Q8C8B0 Gm27275-201ENSMUST00000184318 272 ntBASIC21.46■■□□□ 1.03
Alx1Q8C8B0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Alx1Q8C8B0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Alx1Q8C8B0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Alx1Q8C8B0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Alx1Q8C8B0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Alx1Q8C8B0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Alx1Q8C8B0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Alx1Q8C8B0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Alx1Q8C8B0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Alx1Q8C8B0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Alx1Q8C8B0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Alx1Q8C8B0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Alx1Q8C8B0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.45■■□□□ 1.02
Alx1Q8C8B0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Alx1Q8C8B0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Alx1Q8C8B0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Alx1Q8C8B0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Alx1Q8C8B0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Alx1Q8C8B0 Gm27011-201ENSMUST00000182352 972 ntBASIC21.45■■□□□ 1.02
Alx1Q8C8B0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Alx1Q8C8B0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Alx1Q8C8B0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Alx1Q8C8B0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Alx1Q8C8B0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Alx1Q8C8B0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Alx1Q8C8B0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Alx1Q8C8B0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Alx1Q8C8B0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Alx1Q8C8B0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Alx1Q8C8B0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Alx1Q8C8B0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Alx1Q8C8B0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Alx1Q8C8B0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Alx1Q8C8B0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Alx1Q8C8B0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Alx1Q8C8B0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Alx1Q8C8B0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Alx1Q8C8B0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Alx1Q8C8B0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Alx1Q8C8B0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Alx1Q8C8B0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.43■■□□□ 1.02
Alx1Q8C8B0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Alx1Q8C8B0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Alx1Q8C8B0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Alx1Q8C8B0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Alx1Q8C8B0 Gm20760-201ENSMUST00000179197 648 ntBASIC21.43■■□□□ 1.02
Alx1Q8C8B0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Alx1Q8C8B0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.43■■□□□ 1.02
Alx1Q8C8B0 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.43■■□□□ 1.02
Alx1Q8C8B0 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.43■■□□□ 1.02
Alx1Q8C8B0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Alx1Q8C8B0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Alx1Q8C8B0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Alx1Q8C8B0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Alx1Q8C8B0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Alx1Q8C8B0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Alx1Q8C8B0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Alx1Q8C8B0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Alx1Q8C8B0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms