Protein–RNA interactions for Protein: Q70CQ3

USP30, Ubiquitin carboxyl-terminal hydrolase 30, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP30Q70CQ3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
USP30Q70CQ3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP30Q70CQ3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
USP30Q70CQ3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP30Q70CQ3 FAM99A-202ENST00000538190 1989 ntBASIC20.94■□□□□ 0.94
USP30Q70CQ3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP30Q70CQ3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP30Q70CQ3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.94■□□□□ 0.94
USP30Q70CQ3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
USP30Q70CQ3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
USP30Q70CQ3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.94■□□□□ 0.94
USP30Q70CQ3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.94■□□□□ 0.94
USP30Q70CQ3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP30Q70CQ3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP30Q70CQ3 AC010542.4-201ENST00000563151 1910 ntBASIC20.94■□□□□ 0.94
USP30Q70CQ3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP30Q70CQ3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP30Q70CQ3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP30Q70CQ3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP30Q70CQ3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP30Q70CQ3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
USP30Q70CQ3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP30Q70CQ3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP30Q70CQ3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP30Q70CQ3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP30Q70CQ3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.93■□□□□ 0.94
USP30Q70CQ3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.93■□□□□ 0.94
USP30Q70CQ3 CDV3P1-201ENST00000471403 739 ntBASIC20.93■□□□□ 0.94
USP30Q70CQ3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.93■□□□□ 0.94
USP30Q70CQ3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.93■□□□□ 0.94
USP30Q70CQ3 RNA5SP413-201ENST00000516373 109 ntBASIC20.93■□□□□ 0.94
USP30Q70CQ3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP30Q70CQ3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.93■□□□□ 0.94
USP30Q70CQ3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP30Q70CQ3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
USP30Q70CQ3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
USP30Q70CQ3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.93■□□□□ 0.94
USP30Q70CQ3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP30Q70CQ3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP30Q70CQ3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.92■□□□□ 0.94
USP30Q70CQ3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP30Q70CQ3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.92■□□□□ 0.94
USP30Q70CQ3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP30Q70CQ3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP30Q70CQ3 AC091874.3-201ENST00000512672 1195 ntBASIC20.92■□□□□ 0.94
USP30Q70CQ3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.92■□□□□ 0.94
USP30Q70CQ3 AC100791.3-201ENST00000617619 330 ntBASIC20.92■□□□□ 0.94
USP30Q70CQ3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.92■□□□□ 0.94
USP30Q70CQ3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP30Q70CQ3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP30Q70CQ3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP30Q70CQ3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP30Q70CQ3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP30Q70CQ3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP30Q70CQ3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP30Q70CQ3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.92■□□□□ 0.94
USP30Q70CQ3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP30Q70CQ3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP30Q70CQ3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP30Q70CQ3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.91■□□□□ 0.94
USP30Q70CQ3 POU5F1P3-201ENST00000428824 1078 ntBASIC20.91■□□□□ 0.94
USP30Q70CQ3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.91■□□□□ 0.94
USP30Q70CQ3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.91■□□□□ 0.94
USP30Q70CQ3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.91■□□□□ 0.94
USP30Q70CQ3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.91■□□□□ 0.94
USP30Q70CQ3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
USP30Q70CQ3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.91■□□□□ 0.94
USP30Q70CQ3 AC083880.1-201ENST00000608266 535 ntBASIC20.91■□□□□ 0.94
USP30Q70CQ3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP30Q70CQ3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP30Q70CQ3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP30Q70CQ3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP30Q70CQ3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.9■□□□□ 0.94
USP30Q70CQ3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP30Q70CQ3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP30Q70CQ3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.9■□□□□ 0.94
USP30Q70CQ3 C11orf96-202ENST00000528572 1834 ntBASIC20.9■□□□□ 0.94
USP30Q70CQ3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP30Q70CQ3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.9■□□□□ 0.94
USP30Q70CQ3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
USP30Q70CQ3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.9■□□□□ 0.94
USP30Q70CQ3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
USP30Q70CQ3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP30Q70CQ3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
USP30Q70CQ3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP30Q70CQ3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.9■□□□□ 0.94
USP30Q70CQ3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP30Q70CQ3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
USP30Q70CQ3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.9■□□□□ 0.94
USP30Q70CQ3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.9■□□□□ 0.94
USP30Q70CQ3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP30Q70CQ3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP30Q70CQ3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP30Q70CQ3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP30Q70CQ3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.9■□□□□ 0.94
USP30Q70CQ3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP30Q70CQ3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP30Q70CQ3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP30Q70CQ3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
USP30Q70CQ3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms