Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Shroom1Q5SX79 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Shroom1Q5SX79 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shroom1Q5SX79 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shroom1Q5SX79 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shroom1Q5SX79 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.47■□□□□ 0.71
Shroom1Q5SX79 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shroom1Q5SX79 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Shroom1Q5SX79 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shroom1Q5SX79 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shroom1Q5SX79 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shroom1Q5SX79 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shroom1Q5SX79 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Shroom1Q5SX79 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shroom1Q5SX79 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Shroom1Q5SX79 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shroom1Q5SX79 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Shroom1Q5SX79 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shroom1Q5SX79 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Shroom1Q5SX79 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shroom1Q5SX79 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Shroom1Q5SX79 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Shroom1Q5SX79 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Shroom1Q5SX79 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shroom1Q5SX79 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shroom1Q5SX79 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Shroom1Q5SX79 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shroom1Q5SX79 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Shroom1Q5SX79 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Shroom1Q5SX79 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shroom1Q5SX79 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.46■□□□□ 0.71
Shroom1Q5SX79 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shroom1Q5SX79 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Shroom1Q5SX79 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Shroom1Q5SX79 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shroom1Q5SX79 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shroom1Q5SX79 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.45■□□□□ 0.7
Shroom1Q5SX79 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Shroom1Q5SX79 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shroom1Q5SX79 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.45■□□□□ 0.7
Shroom1Q5SX79 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.45■□□□□ 0.7
Shroom1Q5SX79 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.45■□□□□ 0.7
Shroom1Q5SX79 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shroom1Q5SX79 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shroom1Q5SX79 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Shroom1Q5SX79 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Shroom1Q5SX79 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.45■□□□□ 0.7
Shroom1Q5SX79 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shroom1Q5SX79 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shroom1Q5SX79 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Shroom1Q5SX79 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shroom1Q5SX79 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shroom1Q5SX79 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shroom1Q5SX79 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shroom1Q5SX79 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shroom1Q5SX79 Gm2399-201ENSMUST00000104944 225 ntBASIC19.44■□□□□ 0.7
Shroom1Q5SX79 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.44■□□□□ 0.7
Shroom1Q5SX79 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shroom1Q5SX79 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shroom1Q5SX79 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Shroom1Q5SX79 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.44■□□□□ 0.7
Shroom1Q5SX79 Gm6576-201ENSMUST00000169678 883 ntBASIC19.44■□□□□ 0.7
Shroom1Q5SX79 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.44■□□□□ 0.7
Shroom1Q5SX79 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shroom1Q5SX79 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Shroom1Q5SX79 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shroom1Q5SX79 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shroom1Q5SX79 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shroom1Q5SX79 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shroom1Q5SX79 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.44■□□□□ 0.7
Shroom1Q5SX79 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shroom1Q5SX79 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shroom1Q5SX79 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shroom1Q5SX79 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shroom1Q5SX79 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.43■□□□□ 0.7
Shroom1Q5SX79 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Shroom1Q5SX79 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shroom1Q5SX79 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shroom1Q5SX79 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shroom1Q5SX79 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shroom1Q5SX79 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shroom1Q5SX79 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shroom1Q5SX79 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shroom1Q5SX79 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shroom1Q5SX79 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shroom1Q5SX79 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shroom1Q5SX79 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shroom1Q5SX79 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shroom1Q5SX79 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shroom1Q5SX79 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shroom1Q5SX79 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Shroom1Q5SX79 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shroom1Q5SX79 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.42■□□□□ 0.7
Shroom1Q5SX79 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shroom1Q5SX79 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shroom1Q5SX79 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shroom1Q5SX79 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shroom1Q5SX79 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shroom1Q5SX79 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shroom1Q5SX79 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms