Protein–RNA interactions for Protein: Q3UZD5

Prdm6, Putative histone-lysine N-methyltransferase PRDM6, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm6Q3UZD5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prdm6Q3UZD5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prdm6Q3UZD5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Prdm6Q3UZD5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prdm6Q3UZD5 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prdm6Q3UZD5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm6Q3UZD5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm6Q3UZD5 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm6Q3UZD5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm6Q3UZD5 Gm38027-201ENSMUST00000192315 235 ntBASIC17.69■□□□□ 0.42
Prdm6Q3UZD5 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Prdm6Q3UZD5 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm6Q3UZD5 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Prdm6Q3UZD5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm6Q3UZD5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Prdm6Q3UZD5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.69■□□□□ 0.42
Prdm6Q3UZD5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm6Q3UZD5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prdm6Q3UZD5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Prdm6Q3UZD5 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prdm6Q3UZD5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prdm6Q3UZD5 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prdm6Q3UZD5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.68■□□□□ 0.42
Prdm6Q3UZD5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prdm6Q3UZD5 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.68■□□□□ 0.42
Prdm6Q3UZD5 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prdm6Q3UZD5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prdm6Q3UZD5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prdm6Q3UZD5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prdm6Q3UZD5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prdm6Q3UZD5 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm6Q3UZD5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Prdm6Q3UZD5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm6Q3UZD5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm6Q3UZD5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm6Q3UZD5 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm6Q3UZD5 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm6Q3UZD5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm6Q3UZD5 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Prdm6Q3UZD5 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
Prdm6Q3UZD5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm6Q3UZD5 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
Prdm6Q3UZD5 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.67■□□□□ 0.42
Prdm6Q3UZD5 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
Prdm6Q3UZD5 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm6Q3UZD5 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm6Q3UZD5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm6Q3UZD5 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm6Q3UZD5 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm6Q3UZD5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
Prdm6Q3UZD5 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prdm6Q3UZD5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prdm6Q3UZD5 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.66■□□□□ 0.42
Prdm6Q3UZD5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.66■□□□□ 0.42
Prdm6Q3UZD5 Gm13474-201ENSMUST00000122466 815 ntBASIC17.66■□□□□ 0.42
Prdm6Q3UZD5 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prdm6Q3UZD5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prdm6Q3UZD5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.66■□□□□ 0.42
Prdm6Q3UZD5 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.66■□□□□ 0.42
Prdm6Q3UZD5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prdm6Q3UZD5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prdm6Q3UZD5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.66■□□□□ 0.42
Prdm6Q3UZD5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prdm6Q3UZD5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prdm6Q3UZD5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prdm6Q3UZD5 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Prdm6Q3UZD5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prdm6Q3UZD5 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.65■□□□□ 0.42
Prdm6Q3UZD5 Gm38285-201ENSMUST00000192928 922 ntBASIC17.65■□□□□ 0.42
Prdm6Q3UZD5 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prdm6Q3UZD5 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.65■□□□□ 0.42
Prdm6Q3UZD5 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prdm6Q3UZD5 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prdm6Q3UZD5 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.65■□□□□ 0.42
Prdm6Q3UZD5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prdm6Q3UZD5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prdm6Q3UZD5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prdm6Q3UZD5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prdm6Q3UZD5 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Prdm6Q3UZD5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prdm6Q3UZD5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prdm6Q3UZD5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prdm6Q3UZD5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prdm6Q3UZD5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Prdm6Q3UZD5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prdm6Q3UZD5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prdm6Q3UZD5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Prdm6Q3UZD5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Prdm6Q3UZD5 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Prdm6Q3UZD5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prdm6Q3UZD5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prdm6Q3UZD5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prdm6Q3UZD5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prdm6Q3UZD5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prdm6Q3UZD5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prdm6Q3UZD5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.63■□□□□ 0.41
Prdm6Q3UZD5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Prdm6Q3UZD5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prdm6Q3UZD5 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Prdm6Q3UZD5 Gm7370-201ENSMUST00000219471 767 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms