Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 SOP4YJL192C 705 nt3.47□□□□□ -1.85
HRD3Q05787 NFU1YKL040C 771 nt3.47□□□□□ -1.85
HRD3Q05787 PAU4YLR461W 363 nt3.47□□□□□ -1.85
HRD3Q05787 YNL150WYNL150W 408 nt3.47□□□□□ -1.85
HRD3Q05787 IGO1YNL157W 507 nt3.47□□□□□ -1.85
HRD3Q05787 PHO80YOL001W 882 nt3.47□□□□□ -1.85
HRD3Q05787 RPB5YBR154C 648 nt3.47□□□□□ -1.85
HRD3Q05787 SEC66YBR171W 621 nt3.47□□□□□ -1.85
HRD3Q05787 YBR201C-AYBR201C-A 204 nt3.47□□□□□ -1.85
HRD3Q05787 RRN7YJL025W 1545 nt3.47□□□□□ -1.85
HRD3Q05787 EMC1YCL045C 2283 nt3.46□□□□□ -1.85
HRD3Q05787 HDA2YDR295C 2025 nt3.46□□□□□ -1.86
HRD3Q05787 OSH3YHR073W 2991 nt3.46□□□□□ -1.86
HRD3Q05787 PEP7YDR323C 1548 nt3.46□□□□□ -1.86
HRD3Q05787 YDR114CYDR114C 303 nt3.46□□□□□ -1.86
HRD3Q05787 NSA2YER126C 786 nt3.46□□□□□ -1.86
HRD3Q05787 YIR020C-BYIR020C-B 735 nt3.46□□□□□ -1.86
HRD3Q05787 RPL19BYBL027W 570 nt3.46□□□□□ -1.86
HRD3Q05787 SNU56YDR240C 1479 nt3.46□□□□□ -1.86
HRD3Q05787 VPS30YPL120W 1674 nt3.46□□□□□ -1.86
HRD3Q05787 ABP140YOR239W 1887 nt3.45□□□□□ -1.86
HRD3Q05787 PIN4YBL051C 2007 nt3.45□□□□□ -1.86
HRD3Q05787 YER046W-AYER046W-A 330 nt3.45□□□□□ -1.86
HRD3Q05787 IES3YLR052W 753 nt3.45□□□□□ -1.86
HRD3Q05787 YKE2YLR200W 345 nt3.45□□□□□ -1.86
HRD3Q05787 YMR052C-AYMR052C-A 366 nt3.45□□□□□ -1.86
HRD3Q05787 TOM22YNL131W 459 nt3.45□□□□□ -1.86
HRD3Q05787 VPS9YML097C 1356 nt3.44□□□□□ -1.86
HRD3Q05787 tC(GCA)BtC(GCA)B 72 nt3.44□□□□□ -1.86
HRD3Q05787 tC(GCA)GtC(GCA)G 72 nt3.44□□□□□ -1.86
HRD3Q05787 tC(GCA)P1tC(GCA)P1 72 nt3.44□□□□□ -1.86
HRD3Q05787 tC(GCA)P2tC(GCA)P2 72 nt3.44□□□□□ -1.86
HRD3Q05787 CHZ1YER030W 462 nt3.44□□□□□ -1.86
HRD3Q05787 FMP10YER182W 735 nt3.44□□□□□ -1.86
HRD3Q05787 AGA2YGL032C 264 nt3.44□□□□□ -1.86
HRD3Q05787 YHL009W-AYHL009W-A 1242 nt3.44□□□□□ -1.86
HRD3Q05787 ASG7YJL170C 630 nt3.44□□□□□ -1.86
HRD3Q05787 IDP2YLR174W 1239 nt3.44□□□□□ -1.86
HRD3Q05787 VPS63YLR261C 327 nt3.44□□□□□ -1.86
HRD3Q05787 YMR173W-AYMR173W-A 1185 nt3.44□□□□□ -1.86
HRD3Q05787 INO4YOL108C 456 nt3.44□□□□□ -1.86
HRD3Q05787 GRE2YOL151W 1029 nt3.44□□□□□ -1.86
HRD3Q05787 YPL107WYPL107W 747 nt3.44□□□□□ -1.86
HRD3Q05787 AFT2YPL202C 1251 nt3.44□□□□□ -1.86
HRD3Q05787 RPC40YPR110C 1008 nt3.44□□□□□ -1.86
HRD3Q05787 IOC2YLR095C 2439 nt3.44□□□□□ -1.86
HRD3Q05787 VHR1YIL056W 1923 nt3.44□□□□□ -1.86
HRD3Q05787 GPI1YGR216C 1830 nt3.44□□□□□ -1.86
HRD3Q05787 MDM36YPR083W 1740 nt3.44□□□□□ -1.86
HRD3Q05787 NUP60YAR002W 1620 nt3.44□□□□□ -1.86
HRD3Q05787 TAF6YGL112C 1551 nt3.43□□□□□ -1.86
HRD3Q05787 YPR022CYPR022C 3402 nt3.43□□□□□ -1.86
HRD3Q05787 ARP4YJL081C 1470 nt3.43□□□□□ -1.86
HRD3Q05787 YEL075CYEL075C 369 nt3.43□□□□□ -1.86
HRD3Q05787 tK(UUU)DtK(UUU)D 73 nt3.43□□□□□ -1.86
HRD3Q05787 tK(UUU)G1tK(UUU)G1 73 nt3.43□□□□□ -1.86
HRD3Q05787 tK(UUU)G2tK(UUU)G2 73 nt3.43□□□□□ -1.86
HRD3Q05787 tK(UUU)KtK(UUU)K 73 nt3.43□□□□□ -1.86
HRD3Q05787 tK(UUU)LtK(UUU)L 73 nt3.43□□□□□ -1.86
HRD3Q05787 tK(UUU)OtK(UUU)O 73 nt3.43□□□□□ -1.86
HRD3Q05787 tK(UUU)PtK(UUU)P 73 nt3.43□□□□□ -1.86
HRD3Q05787 YJR111CYJR111C 852 nt3.43□□□□□ -1.86
HRD3Q05787 YKL063CYKL063C 504 nt3.43□□□□□ -1.86
HRD3Q05787 YLR406C-AYLR406C-A 150 nt3.43□□□□□ -1.86
HRD3Q05787 INN1YNL152W 1230 nt3.43□□□□□ -1.86
HRD3Q05787 VAM10YOR068C 345 nt3.43□□□□□ -1.86
HRD3Q05787 GCY1YOR120W 939 nt3.43□□□□□ -1.86
HRD3Q05787 YPL088WYPL088W 1029 nt3.43□□□□□ -1.86
HRD3Q05787 FRE4YNR060W 2160 nt3.43□□□□□ -1.86
HRD3Q05787 SSM4YIL030C 3960 nt3.43□□□□□ -1.86
HRD3Q05787 GPI10YGL142C 1851 nt3.43□□□□□ -1.86
HRD3Q05787 GSC2YGR032W 5688 nt3.43□□□□□ -1.86
HRD3Q05787 YGL140CYGL140C 3660 nt3.42□□□□□ -1.86
HRD3Q05787 IRC3YDR332W 2070 nt3.42□□□□□ -1.86
HRD3Q05787 APC5YOR249C 2058 nt3.42□□□□□ -1.86
HRD3Q05787 APL4YPR029C 2499 nt3.42□□□□□ -1.86
HRD3Q05787 YDR115WYDR115W 318 nt3.42□□□□□ -1.86
HRD3Q05787 PUG1YER185W 912 nt3.42□□□□□ -1.86
HRD3Q05787 RPL9AYGL147C 576 nt3.42□□□□□ -1.86
HRD3Q05787 COX13YGL191W 390 nt3.42□□□□□ -1.86
HRD3Q05787 YLR171WYLR171W 390 nt3.42□□□□□ -1.86
HRD3Q05787 YBL028CYBL028C 321 nt3.42□□□□□ -1.86
HRD3Q05787 TPK2YPL203W 1143 nt3.42□□□□□ -1.86
HRD3Q05787 YPR108W-AYPR108W-A 213 nt3.42□□□□□ -1.86
HRD3Q05787 MBA1YBR185C 837 nt3.42□□□□□ -1.86
HRD3Q05787 snR41snR41 95 nt3.42□□□□□ -1.86
HRD3Q05787 UBP16YPL072W 1500 nt3.42□□□□□ -1.86
HRD3Q05787 NUP159YIL115C 4383 nt3.42□□□□□ -1.86
HRD3Q05787 SKO1YNL167C 1944 nt3.42□□□□□ -1.86
HRD3Q05787 GAL80YML051W 1308 nt3.42□□□□□ -1.86
HRD3Q05787 MDN1YLR106C 14733 nt3.42□□□□□ -1.86
HRD3Q05787 15S_rRNA15S_rRNA 1649 nt3.41□□□□□ -1.86
HRD3Q05787 DAN4YJR151C 3486 nt3.41□□□□□ -1.86
HRD3Q05787 RPA135YPR010C 3612 nt3.41□□□□□ -1.86
HRD3Q05787 SLK19YOR195W 2466 nt3.41□□□□□ -1.86
HRD3Q05787 YCR045W-AYCR045W-A 351 nt3.41□□□□□ -1.86
HRD3Q05787 YDR262WYDR262W 819 nt3.41□□□□□ -1.86
HRD3Q05787 VMA10YHR039C-A 345 nt3.41□□□□□ -1.86
HRD3Q05787 YHR130CYHR130C 336 nt3.41□□□□□ -1.86
HRD3Q05787 YIL141WYIL141W 390 nt3.41□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 64.3 ms