Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1aP97445 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cacna1aP97445 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1aP97445 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.89■□□□□ 0.3
Cacna1aP97445 Gm15375-201ENSMUST00000119510 849 ntBASIC16.89■□□□□ 0.3
Cacna1aP97445 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.89■□□□□ 0.3
Cacna1aP97445 Gm3375-201ENSMUST00000203929 796 ntBASIC16.89■□□□□ 0.3
Cacna1aP97445 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cacna1aP97445 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1aP97445 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cacna1aP97445 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.89■□□□□ 0.29
Cacna1aP97445 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.89■□□□□ 0.29
Cacna1aP97445 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1aP97445 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cacna1aP97445 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1aP97445 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.89■□□□□ 0.29
Cacna1aP97445 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1aP97445 Gm43183-201ENSMUST00000200632 547 ntBASIC16.88■□□□□ 0.29
Cacna1aP97445 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.88■□□□□ 0.29
Cacna1aP97445 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cacna1aP97445 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1aP97445 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.88■□□□□ 0.29
Cacna1aP97445 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1aP97445 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1aP97445 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1aP97445 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1aP97445 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1aP97445 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1aP97445 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1aP97445 Gm6345-202ENSMUST00000180900 204 ntBASIC16.87■□□□□ 0.29
Cacna1aP97445 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1aP97445 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1aP97445 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1aP97445 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1aP97445 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Cacna1aP97445 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1aP97445 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Cacna1aP97445 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.87■□□□□ 0.29
Cacna1aP97445 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1aP97445 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cacna1aP97445 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1aP97445 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Cacna1aP97445 Gm42545-201ENSMUST00000202755 922 ntBASIC16.87■□□□□ 0.29
Cacna1aP97445 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.87■□□□□ 0.29
Cacna1aP97445 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1aP97445 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1aP97445 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cacna1aP97445 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1aP97445 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1aP97445 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1aP97445 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cacna1aP97445 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.86■□□□□ 0.29
Cacna1aP97445 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1aP97445 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.86■□□□□ 0.29
Cacna1aP97445 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1aP97445 Gm10013-201ENSMUST00000106074 672 ntBASIC16.86■□□□□ 0.29
Cacna1aP97445 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1aP97445 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1aP97445 Gm33142-201ENSMUST00000193913 867 ntBASIC16.86■□□□□ 0.29
Cacna1aP97445 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1aP97445 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cacna1aP97445 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1aP97445 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1aP97445 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.85■□□□□ 0.29
Cacna1aP97445 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cacna1aP97445 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1aP97445 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1aP97445 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1aP97445 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1aP97445 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1aP97445 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.85■□□□□ 0.29
Cacna1aP97445 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.85■□□□□ 0.29
Cacna1aP97445 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1aP97445 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.85■□□□□ 0.29
Cacna1aP97445 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1aP97445 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1aP97445 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1aP97445 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Cacna1aP97445 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1aP97445 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.84■□□□□ 0.29
Cacna1aP97445 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1aP97445 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1aP97445 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1aP97445 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1aP97445 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cacna1aP97445 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Cacna1aP97445 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1aP97445 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1aP97445 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1aP97445 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1aP97445 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1aP97445 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cacna1aP97445 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cacna1aP97445 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cacna1aP97445 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.83■□□□□ 0.29
Cacna1aP97445 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1aP97445 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1aP97445 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Cacna1aP97445 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.83■□□□□ 0.28
Cacna1aP97445 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms