Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 ECM21YBL101C 3354 nt3.43□□□□□ -1.86
SUB1P54000 CAF120YNL278W 3183 nt3.43□□□□□ -1.86
SUB1P54000 FAA2YER015W 2235 nt3.42□□□□□ -1.86
SUB1P54000 PSF1YDR013W 627 nt3.42□□□□□ -1.86
SUB1P54000 YGL082WYGL082W 1146 nt3.42□□□□□ -1.86
SUB1P54000 CWC24YLR323C 780 nt3.42□□□□□ -1.86
SUB1P54000 COQ10YOL008W 624 nt3.42□□□□□ -1.86
SUB1P54000 GRE2YOL151W 1029 nt3.42□□□□□ -1.86
SUB1P54000 YRO2YBR054W 1035 nt3.42□□□□□ -1.86
SUB1P54000 RRP15YPR143W 753 nt3.42□□□□□ -1.86
SUB1P54000 ISW1YBR245C 3390 nt3.42□□□□□ -1.86
SUB1P54000 TRM2YKR056W 1920 nt3.42□□□□□ -1.86
SUB1P54000 YLR108CYLR108C 1458 nt3.41□□□□□ -1.86
SUB1P54000 ESC2YDR363W 1371 nt3.41□□□□□ -1.86
SUB1P54000 NMA111YNL123W 2994 nt3.41□□□□□ -1.86
SUB1P54000 GCV2YMR189W 3105 nt3.41□□□□□ -1.86
SUB1P54000 YEL1YBL060W 2064 nt3.41□□□□□ -1.86
SUB1P54000 YDL157CYDL157C 357 nt3.41□□□□□ -1.86
SUB1P54000 PIB1YDR313C 861 nt3.41□□□□□ -1.86
SUB1P54000 KEI1YDR367W 666 nt3.41□□□□□ -1.86
SUB1P54000 SLD5YDR489W 885 nt3.41□□□□□ -1.86
SUB1P54000 RPL11BYGR085C 525 nt3.41□□□□□ -1.86
SUB1P54000 RSM27YGR215W 333 nt3.41□□□□□ -1.86
SUB1P54000 YHR213WYHR213W 597 nt3.41□□□□□ -1.86
SUB1P54000 YLR198CYLR198C 360 nt3.41□□□□□ -1.86
SUB1P54000 YAR062WYAR062W 597 nt3.41□□□□□ -1.86
SUB1P54000 YLR257WYLR257W 966 nt3.41□□□□□ -1.86
SUB1P54000 YNL013CYNL013C 378 nt3.41□□□□□ -1.86
SUB1P54000 CSI2YOL007C 1026 nt3.41□□□□□ -1.86
SUB1P54000 RPL11AYPR102C 525 nt3.41□□□□□ -1.86
SUB1P54000 ARL1YBR164C 552 nt3.41□□□□□ -1.86
SUB1P54000 UTP5YDR398W 1932 nt3.4□□□□□ -1.86
SUB1P54000 IKI3YLR384C 4050 nt3.4□□□□□ -1.86
SUB1P54000 YCR045W-AYCR045W-A 351 nt3.4□□□□□ -1.87
SUB1P54000 GCD10YNL062C 1437 nt3.4□□□□□ -1.87
SUB1P54000 BUD21YOR078W 645 nt3.4□□□□□ -1.87
SUB1P54000 MBA1YBR185C 837 nt3.4□□□□□ -1.87
SUB1P54000 YMR317WYMR317W 3423 nt3.4□□□□□ -1.87
SUB1P54000 SKT5YBL061C 2091 nt3.4□□□□□ -1.87
SUB1P54000 SLU7YDR088C 1149 nt3.39□□□□□ -1.87
SUB1P54000 YOL107WYOL107W 1029 nt3.39□□□□□ -1.87
SUB1P54000 RIB4YOL143C 510 nt3.39□□□□□ -1.87
SUB1P54000 YOR097CYOR097C 528 nt3.39□□□□□ -1.87
SUB1P54000 YLR446WYLR446W 1302 nt3.39□□□□□ -1.87
SUB1P54000 RAV2YDR202C 1056 nt3.38□□□□□ -1.87
SUB1P54000 YFR057WYFR057W 456 nt3.38□□□□□ -1.87
SUB1P54000 YPR014CYPR014C 330 nt3.38□□□□□ -1.87
SUB1P54000 TCB3YML072C 4638 nt3.38□□□□□ -1.87
SUB1P54000 RLI1YDR091C 1827 nt3.37□□□□□ -1.87
SUB1P54000 tL(UAG)JtL(UAG)J 82 nt3.37□□□□□ -1.87
SUB1P54000 tL(UAG)L1tL(UAG)L1 82 nt3.37□□□□□ -1.87
SUB1P54000 tL(UAG)L2tL(UAG)L2 82 nt3.37□□□□□ -1.87
SUB1P54000 FSH1YHR049W 732 nt3.37□□□□□ -1.87
SUB1P54000 YBL010CYBL010C 843 nt3.37□□□□□ -1.87
SUB1P54000 FPR1YNL135C 345 nt3.37□□□□□ -1.87
SUB1P54000 SEC66YBR171W 621 nt3.37□□□□□ -1.87
SUB1P54000 HSE1YHL002W 1359 nt3.37□□□□□ -1.87
SUB1P54000 TOP2YNL088W 4287 nt3.36□□□□□ -1.87
SUB1P54000 SRC1YML034W 2505 nt3.36□□□□□ -1.87
SUB1P54000 STI1YOR027W 1770 nt3.36□□□□□ -1.87
SUB1P54000 CBS2YDR197W 1170 nt3.36□□□□□ -1.87
SUB1P54000 AST2YER101C 1293 nt3.36□□□□□ -1.87
SUB1P54000 IKI1YHR187W 930 nt3.36□□□□□ -1.87
SUB1P54000 YAL037WYAL037W 804 nt3.36□□□□□ -1.87
SUB1P54000 MRP49YKL167C 414 nt3.36□□□□□ -1.87
SUB1P54000 YAL064WYAL064W 285 nt3.36□□□□□ -1.87
SUB1P54000 SPC2YML055W 537 nt3.36□□□□□ -1.87
SUB1P54000 GOT1YMR292W 417 nt3.36□□□□□ -1.87
SUB1P54000 RGA2YDR379W 3030 nt3.36□□□□□ -1.87
SUB1P54000 SDC25YLL016W 3147 nt3.35□□□□□ -1.87
SUB1P54000 SAG1YJR004C 1953 nt3.35□□□□□ -1.87
SUB1P54000 SNA4YDL123W 423 nt3.35□□□□□ -1.87
SUB1P54000 YDR262WYDR262W 819 nt3.35□□□□□ -1.87
SUB1P54000 YER091C-AYER091C-A 222 nt3.35□□□□□ -1.87
SUB1P54000 RPS0AYGR214W 759 nt3.35□□□□□ -1.87
SUB1P54000 PCL5YHR071W 690 nt3.35□□□□□ -1.87
SUB1P54000 PHD1YKL043W 1101 nt3.35□□□□□ -1.87
SUB1P54000 NEJ1YLR265C 1029 nt3.35□□□□□ -1.87
SUB1P54000 GIM5YML094W 492 nt3.35□□□□□ -1.87
SUB1P54000 HEM4YOR278W 828 nt3.35□□□□□ -1.87
SUB1P54000 HAT1YPL001W 1125 nt3.35□□□□□ -1.87
SUB1P54000 SSL1YLR005W 1386 nt3.35□□□□□ -1.87
SUB1P54000 YSP2YDR326C 4317 nt3.34□□□□□ -1.87
SUB1P54000 NSE4YDL105W 1209 nt3.34□□□□□ -1.87
SUB1P54000 GPI19YDR437W 423 nt3.34□□□□□ -1.87
SUB1P54000 TPK3YKL166C 1197 nt3.34□□□□□ -1.87
SUB1P54000 RPS1AYLR441C 768 nt3.34□□□□□ -1.87
SUB1P54000 MGE1YOR232W 687 nt3.34□□□□□ -1.87
SUB1P54000 SHG1YBR258C 429 nt3.34□□□□□ -1.87
SUB1P54000 SNQ2YDR011W 4506 nt3.34□□□□□ -1.87
SUB1P54000 YTA7YGR270W 4140 nt3.34□□□□□ -1.88
SUB1P54000 FUS1YCL027W 1539 nt3.34□□□□□ -1.88
SUB1P54000 YER107W-AYER107W-A 321 nt3.33□□□□□ -1.88
SUB1P54000 BTN2YGR142W 1233 nt3.33□□□□□ -1.88
SUB1P54000 YIL175WYIL175W 318 nt3.33□□□□□ -1.88
SUB1P54000 YJL222W-BYJL222W-B 138 nt3.33□□□□□ -1.88
SUB1P54000 ECI1YLR284C 843 nt3.33□□□□□ -1.88
SUB1P54000 RXT2YBR095C 1293 nt3.33□□□□□ -1.88
SUB1P54000 DNL4YOR005C 2835 nt3.33□□□□□ -1.88
SUB1P54000 CHS2YBR038W 2892 nt3.33□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 108 ms