Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
HAPLN3Q96S86 KRT16P2-201ENST00000414673 1423 ntBASIC21.73■■□□□ 1.07
HAPLN3Q96S86 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HAPLN3Q96S86 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
HAPLN3Q96S86 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HAPLN3Q96S86 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HAPLN3Q96S86 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.73■■□□□ 1.07
HAPLN3Q96S86 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.73■■□□□ 1.07
HAPLN3Q96S86 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HAPLN3Q96S86 SLC7A5P1-201ENST00000568957 537 ntBASIC21.73■■□□□ 1.07
HAPLN3Q96S86 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HAPLN3Q96S86 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HAPLN3Q96S86 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
HAPLN3Q96S86 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HAPLN3Q96S86 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.73■■□□□ 1.07
HAPLN3Q96S86 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
HAPLN3Q96S86 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HAPLN3Q96S86 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HAPLN3Q96S86 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.73■■□□□ 1.07
HAPLN3Q96S86 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.72■■□□□ 1.07
HAPLN3Q96S86 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HAPLN3Q96S86 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HAPLN3Q96S86 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.72■■□□□ 1.07
HAPLN3Q96S86 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HAPLN3Q96S86 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
HAPLN3Q96S86 AC006015.1-201ENST00000429970 570 ntBASIC21.72■■□□□ 1.07
HAPLN3Q96S86 KRT18P11-201ENST00000435214 1283 ntBASIC21.72■■□□□ 1.07
HAPLN3Q96S86 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.72■■□□□ 1.07
HAPLN3Q96S86 SLC7A5P2-201ENST00000553010 536 ntBASIC21.72■■□□□ 1.07
HAPLN3Q96S86 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.72■■□□□ 1.07
HAPLN3Q96S86 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.72■■□□□ 1.07
HAPLN3Q96S86 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HAPLN3Q96S86 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HAPLN3Q96S86 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HAPLN3Q96S86 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HAPLN3Q96S86 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.72■■□□□ 1.07
HAPLN3Q96S86 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HAPLN3Q96S86 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HAPLN3Q96S86 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HAPLN3Q96S86 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
HAPLN3Q96S86 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
HAPLN3Q96S86 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
HAPLN3Q96S86 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HAPLN3Q96S86 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
HAPLN3Q96S86 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.71■■□□□ 1.07
HAPLN3Q96S86 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.71■■□□□ 1.07
HAPLN3Q96S86 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HAPLN3Q96S86 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.71■■□□□ 1.07
HAPLN3Q96S86 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.71■■□□□ 1.07
HAPLN3Q96S86 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.71■■□□□ 1.07
HAPLN3Q96S86 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HAPLN3Q96S86 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HAPLN3Q96S86 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
HAPLN3Q96S86 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HAPLN3Q96S86 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HAPLN3Q96S86 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.7■■□□□ 1.06
HAPLN3Q96S86 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HAPLN3Q96S86 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HAPLN3Q96S86 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.7■■□□□ 1.06
HAPLN3Q96S86 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HAPLN3Q96S86 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HAPLN3Q96S86 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.7■■□□□ 1.06
HAPLN3Q96S86 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.7■■□□□ 1.06
HAPLN3Q96S86 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
HAPLN3Q96S86 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HAPLN3Q96S86 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HAPLN3Q96S86 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HAPLN3Q96S86 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
HAPLN3Q96S86 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HAPLN3Q96S86 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HAPLN3Q96S86 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HAPLN3Q96S86 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
HAPLN3Q96S86 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HAPLN3Q96S86 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.69■■□□□ 1.06
HAPLN3Q96S86 AC016769.1-201ENST00000409132 1010 ntBASIC21.69■■□□□ 1.06
HAPLN3Q96S86 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.69■■□□□ 1.06
HAPLN3Q96S86 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.69■■□□□ 1.06
HAPLN3Q96S86 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.69■■□□□ 1.06
HAPLN3Q96S86 UBE2DNL-204ENST00000602536 740 ntBASIC21.69■■□□□ 1.06
HAPLN3Q96S86 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HAPLN3Q96S86 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
HAPLN3Q96S86 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HAPLN3Q96S86 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HAPLN3Q96S86 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HAPLN3Q96S86 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
HAPLN3Q96S86 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HAPLN3Q96S86 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HAPLN3Q96S86 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HAPLN3Q96S86 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.68■■□□□ 1.06
HAPLN3Q96S86 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
HAPLN3Q96S86 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.68■■□□□ 1.06
HAPLN3Q96S86 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HAPLN3Q96S86 AC092666.2-201ENST00000613287 246 ntBASIC21.68■■□□□ 1.06
HAPLN3Q96S86 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.68■■□□□ 1.06
HAPLN3Q96S86 MYCNOS-205ENST00000641950 531 ntBASIC21.68■■□□□ 1.06
HAPLN3Q96S86 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HAPLN3Q96S86 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
HAPLN3Q96S86 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
HAPLN3Q96S86 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HAPLN3Q96S86 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms