Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM43Q96BQ3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.01■■□□□ 1.27
TRIM43Q96BQ3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
TRIM43Q96BQ3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
TRIM43Q96BQ3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC23.01■■□□□ 1.27
TRIM43Q96BQ3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.01■■□□□ 1.27
TRIM43Q96BQ3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
TRIM43Q96BQ3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM43Q96BQ3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM43Q96BQ3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM43Q96BQ3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM43Q96BQ3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRIM43Q96BQ3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23■■□□□ 1.27
TRIM43Q96BQ3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23■■□□□ 1.27
TRIM43Q96BQ3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC23■■□□□ 1.27
TRIM43Q96BQ3 AC233702.5-201ENST00000584107 538 ntBASIC23■■□□□ 1.27
TRIM43Q96BQ3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23■■□□□ 1.27
TRIM43Q96BQ3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM43Q96BQ3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM43Q96BQ3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM43Q96BQ3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM43Q96BQ3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM43Q96BQ3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM43Q96BQ3 MCRIP2P1-201ENST00000394346 511 ntBASIC22.99■■□□□ 1.27
TRIM43Q96BQ3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM43Q96BQ3 AC012618.2-201ENST00000428058 849 ntBASIC22.99■■□□□ 1.27
TRIM43Q96BQ3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM43Q96BQ3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC22.99■■□□□ 1.27
TRIM43Q96BQ3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.99■■□□□ 1.27
TRIM43Q96BQ3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
TRIM43Q96BQ3 AC137767.1-201ENST00000602918 1920 ntBASIC22.99■■□□□ 1.27
TRIM43Q96BQ3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.99■■□□□ 1.27
TRIM43Q96BQ3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.99■■□□□ 1.27
TRIM43Q96BQ3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM43Q96BQ3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.98■■□□□ 1.27
TRIM43Q96BQ3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
TRIM43Q96BQ3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM43Q96BQ3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM43Q96BQ3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM43Q96BQ3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM43Q96BQ3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
TRIM43Q96BQ3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC22.98■■□□□ 1.27
TRIM43Q96BQ3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
TRIM43Q96BQ3 RPS2P55-201ENST00000397318 883 ntBASIC22.98■■□□□ 1.27
TRIM43Q96BQ3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM43Q96BQ3 AC107956.1-201ENST00000494359 873 ntBASIC22.98■■□□□ 1.27
TRIM43Q96BQ3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM43Q96BQ3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.98■■□□□ 1.27
TRIM43Q96BQ3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.98■■□□□ 1.27
TRIM43Q96BQ3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM43Q96BQ3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM43Q96BQ3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC22.97■■□□□ 1.27
TRIM43Q96BQ3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.97■■□□□ 1.27
TRIM43Q96BQ3 TSPY15P-201ENST00000457163 923 ntBASIC22.97■■□□□ 1.27
TRIM43Q96BQ3 CDV3P1-201ENST00000471403 739 ntBASIC22.97■■□□□ 1.27
TRIM43Q96BQ3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM43Q96BQ3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM43Q96BQ3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM43Q96BQ3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.97■■□□□ 1.27
TRIM43Q96BQ3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM43Q96BQ3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM43Q96BQ3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM43Q96BQ3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
TRIM43Q96BQ3 KRT18P68-201ENST00000392293 1000 ntBASIC22.96■■□□□ 1.27
TRIM43Q96BQ3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC22.96■■□□□ 1.27
TRIM43Q96BQ3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.96■■□□□ 1.27
TRIM43Q96BQ3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.96■■□□□ 1.27
TRIM43Q96BQ3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
TRIM43Q96BQ3 AC133561.5-201ENST00000635547 218 ntBASIC22.96■■□□□ 1.27
TRIM43Q96BQ3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.96■■□□□ 1.27
TRIM43Q96BQ3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM43Q96BQ3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM43Q96BQ3 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM43Q96BQ3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.96■■□□□ 1.27
TRIM43Q96BQ3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.27
TRIM43Q96BQ3 KRT17P2-201ENST00000300992 1314 ntBASIC22.95■■□□□ 1.26
TRIM43Q96BQ3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
TRIM43Q96BQ3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TRIM43Q96BQ3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
TRIM43Q96BQ3 POM121L13P-201ENST00000422362 380 ntBASIC22.95■■□□□ 1.26
TRIM43Q96BQ3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
TRIM43Q96BQ3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
TRIM43Q96BQ3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.95■■□□□ 1.26
TRIM43Q96BQ3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC22.95■■□□□ 1.26
TRIM43Q96BQ3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.95■■□□□ 1.26
TRIM43Q96BQ3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
TRIM43Q96BQ3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.94■■□□□ 1.26
TRIM43Q96BQ3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM43Q96BQ3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.94■■□□□ 1.26
TRIM43Q96BQ3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM43Q96BQ3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.94■■□□□ 1.26
TRIM43Q96BQ3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM43Q96BQ3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
TRIM43Q96BQ3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM43Q96BQ3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC22.94■■□□□ 1.26
TRIM43Q96BQ3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM43Q96BQ3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.94■■□□□ 1.26
TRIM43Q96BQ3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
TRIM43Q96BQ3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC22.94■■□□□ 1.26
TRIM43Q96BQ3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms